SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301605297|gb|XP_002932297| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301605297|gb|XP_002932297|
Domain Number 1 Region: 1434-1601
Classification Level Classification E-value
Superfamily C-type lectin-like 5.07e-43
Family C-type lectin domain 0.000000854
Further Details:      
 
Domain Number 2 Region: 506-618
Classification Level Classification E-value
Superfamily C-type lectin-like 7.42e-42
Family Link domain 0.0011
Further Details:      
 
Domain Number 3 Region: 173-286
Classification Level Classification E-value
Superfamily C-type lectin-like 1.74e-40
Family Link domain 0.0017
Further Details:      
 
Domain Number 4 Region: 287-390
Classification Level Classification E-value
Superfamily C-type lectin-like 8.98e-30
Family Link domain 0.0032
Further Details:      
 
Domain Number 5 Region: 619-713
Classification Level Classification E-value
Superfamily C-type lectin-like 6.3e-29
Family Link domain 0.0069
Further Details:      
 
Domain Number 6 Region: 61-178
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000023
Family V set domains (antibody variable domain-like) 0.011
Further Details:      
 
Domain Number 7 Region: 1602-1662
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000876
Family Complement control module/SCR domain 0.0025
Further Details:      
 
Domain Number 8 Region: 1399-1436
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000126
Family EGF-type module 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301605297|gb|XP_002932297|
Sequence length 1698
Comment PREDICTED: LOW QUALITY PROTEIN: aggrecan core protein-like, partial [Xenopus (Silurana) tropicalis]
Sequence
wlvqyvqhlliqhlxaysfsrrtkllnlvnydhftisvrllaghrcsdihhhnalsviip
veaplkvqlghsltipcffinaledvtvapstapltprikwskhvkgketvllvatdghv
rvndiyqgrvsmptyplaptdvsleisnilsndsgiyrcevmhgiedsqatvevnvkgvv
fhyraistrytldfenakkaciqnsatiatpeqlqaayddgyhqcdagwlsdqtvrypih
npreacygdkdmfpgvrtygvretdetydvycyvedmqgevfyatspekftfdeaekqck
slgarlattgelyvawksgmdmcsagwlgdrsvrypisfarpncggnlvgvrtvylhptn
qtgypnplsrydaicykagpdeeitiqtitqpsleiilprneteeeargsiasleptdft
ltptdfeefftatpelvltegqfenvteevfplenitaslqteapgtadvtfsegpefna
ttslgeqivpataapaeagpekdisktgvvfhyraassryslnfteakqacldnnaiias
paqlqaayeagfdqcdagwisdqtvrypivtprenchgdkngfpgvrnygvvnpnahfdv
ycyidklhgevffatqpdqftfqeakefcdgqnaslastgqlymawrlgldkcragwlsd
gsvrypvvtprracggdvpgvrtvyihpnqtgfpdplskyhafcfreeipgfpsieeeli
vpevvpeveklpsgegptseietvtefenqtdiwlanvtviptidssvtvspsvvpivsp
dpedisgetsaigsgvsgelsglpsgvssgdvsgadlsgqpsgaeesgfpsgtdisgvsg
lpsgdisgdisgepdisglpsgfpsgvedisgqgsgvpdisglssvpietsglpsgepsg
deiisgsasgieiisglfsgtedfsgiasgfptithvdttweeavtkptetelegkgeie
lsasgielsgdlsglepsgevsgfdlsgvtssvvessgdlsgiissgdisgepsgiidls
gevsgvtdisgdlsglkdfsgetsgildfsgelsglsgessgiisvsggfsgdidfsgei
sgvreisgelsgvpdisgsasgileipsgvflidqaltelsqpstkeeegkgsvgisgfy
sgdvdssgdisgildvsggpsgfidisgfvsgavpsgdidisgvsdisgatsgveyvsgl
qsgfddlsgvptvshidftlkepptqgpdtqeagegpsvileisgisgeslpsgthegsl
essgiytsgfsqvtlvtddtveaitkpavsqelggvtfaypietsasgdisteasathet
sgkqetslegstepssgqltflppeisetseseithspeeaqqetelvtsvelgevtdep
tieaaspssliatesegiigscadqpcgagtctekegriycaclpgyggelcnididech
sspcvngatcvdgidsfkclclpsyggdlcqidlevcedgwtkfqghcykhfseretwvd
aenvcryhqshlasiltpeeqefvngnaqdyqwiglndktiendfrwsdanplqyenwrp
nqpdnffttgedcvvmiwhergewndvpcnyhlpftckkgtvacgdppavqnaytlgkkk
aryeisslvryqcnqgylqrhvpiirclptghwdepriqcidrvsviaplgsrvlrkayk
qldlyhkklwrkepntqs
Download sequence
Identical sequences gi|301605297|gb|XP_002932297|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]