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Domain assignment for gi|301607003|gb|XP_002933101| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301607003|gb|XP_002933101|
Domain Number 1 Region: 816-864
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000017
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 2 Region: 335-387
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000279
Family Laminin-type module 0.029
Further Details:      
 
Domain Number 3 Region: 862-914
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000053
Family Laminin-type module 0.0047
Further Details:      
 
Domain Number 4 Region: 923-973
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000711
Family Laminin-type module 0.045
Further Details:      
 
Domain Number 5 Region: 971-1023
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000893
Family Laminin-type module 0.0014
Further Details:      
 
Domain Number 6 Region: 458-502
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000187
Family Laminin-type module 0.0077
Further Details:      
 
Domain Number 7 Region: 768-809
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000419
Family Laminin-type module 0.0092
Further Details:      
 
Domain Number 8 Region: 271-337
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000046
Family Laminin-type module 0.036
Further Details:      
 
Domain Number 9 Region: 510-552
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000012
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 10 Region: 1080-1123
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000502
Family Laminin-type module 0.026
Further Details:      
 
Domain Number 11 Region: 424-460
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000206
Family Laminin-type module 0.023
Further Details:      
 
Domain Number 12 Region: 1023-1077
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000271
Family Laminin-type module 0.0029
Further Details:      
 
Weak hits

Sequence:  gi|301607003|gb|XP_002933101|
Domain Number - Region: 1128-1176
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00024
Family Laminin-type module 0.044
Further Details:      
 
Domain Number - Region: 1436-1652
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0149
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301607003|gb|XP_002933101|
Sequence length 1783
Comment PREDICTED: laminin subunit beta-2-like [Xenopus (Silurana) tropicalis]
Sequence
MAPSLWPFGIVITALVTGSLSQIPDQQHGCSQGSCYPATGDLLVGRADKLKATSTCGLRR
AQPYCIVSHLQDEKKCFVCDSRKPYNPLYNPISHRIENVITTFAPHRKKAWWQSENGVSA
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWQAYRYFGHDCASSFPNVSRS
ALRKVDEVICESRYSDIEPSTEGEVIYRVLDPAIPIRDPYGPNIQNLLKITNLRINFTKL
HTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIQGVSRDVEGMVHGRCVC
KHNTKGLNCEQCDSSFNDLPWRPAEGRSTNACKKCNCNNHSRKCHFDMAVYLSTGNVSGG
VCDDCVHNTMGRNCELCKPFFYKDPSKDLRDSAVCKACDCDPDGSLDGGLCDSLDNPALG
LIAGQCRCKDYVEGPRCDRCKTGFFGLSTNNFQGCQRCQCDPRGTISDGAQCDPISGDCF
CKRFVTGRTCNQCLPEFWALSHDLHGCRSCDCDIGGAWDNHCATETGQCRCRSHMVGRQC
NQVKSGYYRIHLDHYTYEAESALHRQGCSVLERERLIGRPATWTGPGFALVPEGGILEFQ
ISNIPYSMEYDVIIRYEPQLPATWEQVKISVIRPGPIPTSSPCGNTIPADDLMVASLPPG
TRHVVLPQPVCLERGVSYTIRLEFSRYSLREKIPSANILIDSLVLVPRYSSMEMFIAGDP
ASIQRKETFERYRCHSNSGNVIKSSTTEVCSGLITSMSAIIHEGALPCSCDPQGSLSSEC
DPNGGQCQCKANVIGQRCDRCAPGTHGFGPTGCKACECNMEGSTHNFCDQRTGQCPCRPG
AFGSRCDRCQPGHWGFPNCRQCQCNGHSEECDQRTGACLNCRDHSTGDRCERCTAGFYGN
PILGSGDHCRPCPCPEGPNSGRHYAASCHQDPRSRQVICNCKQGYTGPRCEECSPGFFGN
PFQTGGRCLLCQCNNNIDMTDIGGCDRRSGQCLKCKYNTEGRFCEHCRIGFYGDASRRNC
RKCTCNYLGTEPSQCPSREDCMCDRTSGQCLCLPNVRGQNCDRCSPHFWNLASGKGCQPC
NCDPNHSFSLSCNEFTGKCQCRPGFGGLTCTDCQENYWGNPNIQCRACDCDRRGIKAPQC
NRASGHCDCRAGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRIVQDLATRTKSLVQRG
KDIQQSGVAGVYQKNFREIEKKLAKAQGIVNARNATAESVTKLMKIMDDLRNKINESTEA
LTQLEGELTAVQDENFDANHDLAELERDARSLNMTAKERSHQLDVLKNSNFLGAYDSIQQ
SHAKSRQAEKQANNATTNVPSPVSDSARTREKTQQLITHKRDDFNRKNAANRRALNDLAA
KTDTLDMKKINEKVCGAPGDAPCSESPCGGAGCRDDEGKRHCGGLNCNGAVATADNALGR
ARHAEEELQKALGEVEVLFQKVAEAKVKADRAKQRAQATLDRANETKARVEQSNKELREL
IQQIKDFLNQEGADPDSIEMVASRVLDLTIPATPKQIQRLAEEIKDRVKTLANVDAILDQ
TAADVRKAEQLLHEAKRAKNRAENVKNTAESVKRALDDARRAQNAAEGAIQSANDDIKDT
ERKLTAIQTATSSAENQLNDAMDRVGNLDKQIDGLKMKRANNSLAASRAEESATAALDKA
NDAKKILEGQLADKYKTVQNVVDRKAKNIKEAKTKADQLQDEAKKLLENAQDKLKRLQDL
EVEYTKNEKLLQDKAKRLNGLEDKMKEILHAINQQIQIYNTCQ
Download sequence
Identical sequences gi|301607003|gb|XP_002933101| 8364.ENSXETP00000018844 XP_002933101.1.99540

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