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Domain assignment for gi|301607981|gb|XP_002933550| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301607981|gb|XP_002933550|
Domain Number 1 Region: 312-366
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000106
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 2 Region: 375-424
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000162
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 3 Region: 427-474
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000642
Family Laminin-type module 0.0026
Further Details:      
 
Domain Number 4 Region: 246-309
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000159
Family Laminin-type module 0.04
Further Details:      
 
Domain Number 5 Region: 477-516
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000949
Family Laminin-type module 0.018
Further Details:      
 
Domain Number 6 Region: 525-572
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000131
Family Laminin-type module 0.016
Further Details:      
 
Weak hits

Sequence:  gi|301607981|gb|XP_002933550|
Domain Number - Region: 929-1120
Classification Level Classification E-value
Superfamily Tropomyosin 0.000105
Family Tropomyosin 0.0023
Further Details:      
 
Domain Number - Region: 93-171
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000397
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.091
Further Details:      
 
Domain Number - Region: 846-958
Classification Level Classification E-value
Superfamily Mediator hinge subcomplex-like 0.0602
Family CSE2-like 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301607981|gb|XP_002933550|
Sequence length 1157
Comment PREDICTED: laminin subunit beta-3 [Xenopus (Silurana) tropicalis]
Sequence
mwvyalllvlptllhaqndcsrgacypaagdlligrgnylrasstcgiekpetycspyge
mqmkccrcdsrqpfteishritnvlsptghlrwwqssngindvslqfdlnkkfqlsdvil
dfrsprpasmlierssdhgktwqvyqylaydcaasfphirrgvpydlqdvrcqelhgdpt
qggkirfspmelafsvplshsqrvqhladftnlrlnftqlvrlpprryrepstfyavdvm
rvhgscfcyghadrcmpsgaldrdhygeiqvydkcicqhntvgencercadlfhdlpwrp
addnypnecrrcncnnhadkchfdpavyeasgrvsggvcdncrdgttgrncercrsdyyr
npnkdmshrdaciscdcdpegsidggscddltgrcnckenvggercdqckpgyyllsasn
pqgctkctcnpqgmerdqpcdsetgqckclpnvlgqrcdqcatnhwnlasgrgcercgch
prnsyslqcnqatgqclcregfggrfctecpdrmygslqtgcracncdfqgtleqgcdka
ngrclcrpgitgvrcdscqrgysdpfptcrachqcfhfydheinalrshtqsllnmttgq
gqdsdlglgprmaaveaalqrvqristgtpipdnelsraesklsrmrgdaqqlntnlpdp
esfaplsnnihslrgqfnrinllyqskkeqhsssisndasgifmavnsayqsslesaksi
aaaegvlsqskdsrrvalglegkstelladletlkeelsypnltptinricegvridpct
peecpgpvcqrnnnslckvgslcrgafplssnalrntektsqdlqdinnklqknalmiqd
aektasqiqdnakqlteqvsrarsrmeedmghsrqfiqqvrdfltepstdpatiqevsey
ilslklptdassilrkmneirsiagklpnidsvlsqtkddiakakklqseaelarnkakd
vedgvdgvimnlsqaktalqeaedkirgsssslqqiqnrmheieevlspaergltdmhdq
iqqftaqveklrektvenqrlaseahqaaqgangkaleaqqgldamktkyallksrlgqs
snlgaqgekianikmeadrliqesiqmmnkmkvietelqegretllmkfsqlegleeeak
lirdniseralfyatck
Download sequence
Identical sequences XP_012826649.1.99540 gi|301607981|gb|XP_002933550|

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