SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301611320|gb|XP_002935198| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301611320|gb|XP_002935198|
Domain Number 1 Region: 57-237
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 1.03e-43
Family Matrix metalloproteases, catalytic domain 0.00017
Further Details:      
 
Weak hits

Sequence:  gi|301611320|gb|XP_002935198|
Domain Number - Region: 274-342
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00904
Family V set domains (antibody variable domain-like) 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301611320|gb|XP_002935198|
Sequence length 343
Comment PREDICTED: matrix metalloproteinase-23-like [Xenopus (Silurana) tropicalis]
Sequence
mdwgladrsygwicvsaavtflllsnwfcyqqkslifpkfqnevvecgtncsfrssiltr
rkrytinplgykwdhlnltykivqfpntlnkddteralalafrmwskvssltfqrvqshq
vsdlrigfytfnhsdcwgsplhpcfdglngelahaflpprgeihfdnhefwvlgpsrfsw
kqgvwyndlvqvaaheighalglwhssnvtalmhpnatytrirhvtkddimaiqslygcp
ssgsrcyslepsgscgkqchlkcdsckesldqrpkqyrikiknryvsqgrpvtfhcshkv
sqaskrvsslvlkaeeetqgrytcvirhgkvivggkswnlhit
Download sequence
Identical sequences gi|301611320|gb|XP_002935198|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]