SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301611559|gb|XP_002935301| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301611559|gb|XP_002935301|
Domain Number 1 Region: 28-521
Classification Level Classification E-value
Superfamily Sema domain 2.35e-190
Family Sema domain 0.0000000000000139
Further Details:      
 
Domain Number 2 Region: 517-568
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000715
Family Plexin repeat 0.0026
Further Details:      
 
Weak hits

Sequence:  gi|301611559|gb|XP_002935301|
Domain Number - Region: 619-662
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000475
Family I set domains 0.077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301611559|gb|XP_002935301|
Sequence length 766
Comment PREDICTED: semaphorin-3A-like [Xenopus (Silurana) tropicalis]
Sequence
mgsptwiaflflgvslttrlncqnvknnvprlrlsykemlesnnlitfngwpnsssyhtf
vldeergrlyvgakdhifsfnlanvkefqkilwpvtnirrdeckwagkdimkecanfikv
lkvynhthlyacgtgafhpvctyidvgnypeqdnifkledsffengrgkspydpklltas
ilidgelysgtaadfmgrdfaifrtlgnhhpirteqhdsrwlndprfigaylvpesdnpe
ddkvyfffrenaidgehtgkatharigqlckndfgghrslvnkwttflkarlicsvpgpn
gidthfdelqdvflmnskdpknpvvyavfttssnifkgsavcmysladirrvflgpyahr
dgpnyqwvpfqgrvpyprpgtcpsktfggfdstkdlpdevimfarshpamynpvfpinnr
piiiktevdyqftqivvdrveaedgqydvmfigtdmgtvlkvvsvpketwhdleevllee
mtvfreptaisameistkqqqlyigssvgvsqlplhrcdvygkacaecclardpycawdg
sscsryfptakrrtrrqdirngdplthcsdlqhqgflyrvmegatltlvvtrvltvamfd
svamfetksihiiirikvderkiktehglllrtlkkrdsgiyycsavehgfmqtllkvtl
eiidtehldellhkedegdshkhkepsnsmsptqkiwyrdfmqlinhpnlntmdefceqv
wkrdrkqrrqkngnvqvsntkwkhlqenkkgrnrrtheferaprsv
Download sequence
Identical sequences gi|301611559|gb|XP_002935301|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]