SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301611708|gb|XP_002935372| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301611708|gb|XP_002935372|
Domain Number 1 Region: 34-411
Classification Level Classification E-value
Superfamily Sema domain 9.81e-26
Family Sema domain 0.018
Further Details:      
 
Domain Number 2 Region: 925-1029,1170-1315
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 5.65e-21
Family p120GAP domain-like 0.043
Further Details:      
 
Domain Number 3 Region: 413-451
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000075
Family Plexin repeat 0.002
Further Details:      
 
Weak hits

Sequence:  gi|301611708|gb|XP_002935372|
Domain Number - Region: 617-652
Classification Level Classification E-value
Superfamily E set domains 0.00809
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.09
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301611708|gb|XP_002935372|
Sequence length 1386
Comment PREDICTED: plexin-C1-like [Xenopus (Silurana) tropicalis]
Sequence
mppgfhvinlfsalwllsidsvlsedprllvsavrniavgsdyvvvatesclylfdhtls
qrlaetsanesstecrgsapgqatmgqkppynmlllvyrdivlscwitntsfcnerklnk
fenissitpdlltpntslsaagiifsneqtylilatfkennkqndlrplsiktrqtigfi
tenensyaelntttvlqfvnafswerifffpyfvpeldnakilsvknpkgadlqlwglah
lpcgsdirrgvilssfhfmksgghfwagiftsqsqamspdktalciynltnmmkqekeci
aedfrdecsskdhsaknslpilpinlgptlthgnlsavfavevqnkmvfflgtgngqvlk
vtldsewkancpeilfqfdndtavsrtikadpvnstyiyvaaenkikrikvancesfkty
keclsakdpycgwchsqtrctlnaecipsdvpgnwngmseeggnyldflvvpikdkqlri
takssnaknttwqctvqnvgtnktlcngvaeknsmkcsclvsttglsdndqlgieltngk
rsvsdvfqfkkcrqlqnrqtaqlyhqnqpisveisqivndthavlslpksrkevksicfn
pkengcsenktinyvslpscfnispntawhgggrnititgknmdivnslivsntlhqwrp
iilcpgnisqckflapqfaaptqwlninmsvvdntfiacgslkylenpcftsfavlndid
telelrikktndnlgiqrqemqihiyylnkiydcivynitqnlkestvfckakkdsrdki
dvsimkvnvtlgnfttiletpgfprlyillvllliplllviiaaclvtkrkskemsnkls
eqleqlecdvieeirsgfaelqmdkldmtvesvgtipfldykhfalrtflpeieeskndf
tekmyenvpspfrnrtvdenehlhllrklfekkrflvhlihtlehqsnfsvrdrcrfasf
ltisfqsnlvyltellevlikdlmdqssnkqpklmlrrtesvveklltnwmstclygylr
dlnvyfpngseenvtesikvtvldcdtvgqakekivqkffikkgynwgfplhdtglvlhh
gqlqkqlsdidntsvvlengiiklntlkhykiedgvtvkviiqkncdvqdlensskychl
vlpssqgseqiegeenqgkhkfqvkelyltkllstkvaihssveklfrsiwtiptnkppt
avkyffdlldsqaeikkitdldvlhiwktnslplrfwvnilknpqfvfdlkkthllescl
sviaqafmdsfsiseqhlgkssptnkllyakdipmfkeevknyykgirdappvssaelne
flmaeskkhenefkedvallelykyikryhqvvldmlekepgfedeqkqllditalmedk
kkcmwn
Download sequence
Identical sequences gi|301611708|gb|XP_002935372|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]