SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301611779|gb|XP_002935411| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301611779|gb|XP_002935411|
Domain Number 1 Region: 681-862
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.69e-37
Family Laminin G-like module 0.0035
Further Details:      
 
Domain Number 2 Region: 875-1070
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.03e-36
Family Laminin G-like module 0.0013
Further Details:      
 
Domain Number 3 Region: 1079-1260
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.49e-35
Family Laminin G-like module 0.000000481
Further Details:      
 
Domain Number 4 Region: 463-661
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.86e-33
Family Laminin G-like module 0.0016
Further Details:      
 
Domain Number 5 Region: 266-435
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.63e-33
Family Laminin G-like module 0.0033
Further Details:      
 
Domain Number 6 Region: 13-178
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.43e-26
Family Laminin G-like module 0.0031
Further Details:      
 
Domain Number 7 Region: 214-246
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000637
Family EGF-type module 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301611779|gb|XP_002935411|
Sequence length 1652
Comment PREDICTED: neurexin-2-alpha-like [Xenopus (Silurana) tropicalis]
Sequence
mwsllclssllslplrsfslqfqgapgqwvrysrptsasgnggwgedlnfrlrtnasrgl
llyqddegdcdflelvldggrprlrfsiscsepavvrlprvvsdglwhaiviggngregw
lsvdgergvaevrskrkemllrsdlfvgglpsdlrlsaltlggakyeppflgeleslklg
grpgqllashgvggteeeaerveegkrlhscrganpclnggrcrdeeegevrcdcrdtgy
hgencsegesksevpahltlsnqgkeeyaatfrgneffcydlshspiqssadeitlsfrt
lqrnglmlhtgksadyvnlslksgavwlvinlgsgafealvepvngkfndnswhdvrvtr
nlrqhagighalvtisvdgiltstgytqedytmlgsddffyiggspntadlpgspvsnnf
mgclkdvvyknndfklelsrlasegdpkmrlsgdlvfrcenvpsldpvtfqnpnsflrlp
rwetkkagsisfdfrttepsglllfsqgrprvggsalgtgagavgtgrperqpkadyfav
ellegtlyllldlgsggikvkashkkindgewchvdiqrdgrkgsisvnsrntpfqvgge
seildldgdmylgglpepredlqlppevwtaslglgfvgcirdlfvdgksrdirrlaelp
gapglapfctretqrqctsspcrnggqcregwnryicdcvgtgylgdscereaavlsydg
tmylkvllpgvshteaedvslrfmsqrayglllattskesadtlrleldggkvkltvnlg
kgpetlfagqklndnewhtvrvlrrgkylqlsvdnvtveghmagdhtrlelhhletgimt
errfvsalpsnflghltalryngapyldmcqdgelrcelntragslrpiladpvvfqtgp
aylalpqlqayasmhllfmfrgrnpdglllynggqgpdfiavelvkgyihyvfdlgngps
lmkgnserplndnqwhsvaisrdpgnvhtlridgrtvtqhstgasnldlkgelyigglpr
nmyatlpklvasrdgfqgclasvdlngrlpellndalhrvgpvergcdgpsttcseescg
nlgvclqqwdgftcdctmtsyggplcndpgttyifgkggalitytwppndrpstradrla
vgfttqqkdavllrvdsatglgdylqlhidqgtvgvifnvgtdditieepgalvsdgkyh
vvrftrsggnatlqvdswpvnerypagrqltifnsqaeikvggkdqgrpfqgqisglyyn
glkvlslaaendpnvktegnlrligevpsvmttettattlladmsttimettttmatttt
rkgrsptmrdsitqxxxxxxxxxxecpsddedleecepstggelilpiitedsldtppia
trspfvpppptyrtvltlvdttkdslsvpsnsrppcpseqedsdcdeaievsgdssgevs
essfpptddedfesifpmitertllsrsdgsprkppgyrpnvrtggstsspydlltstts
pdlvrnipagkmnnreppkpnldqypyiptsvdkkkqrfppitsspnfhnfptanptgsg
ekispveviresssttgmvvgivaaaalcilillyamykyrnrdegsyqvdqsrnyisns
aqsngavvkekttpttktagkskknkdkeyyv
Download sequence
Identical sequences gi|301611779|gb|XP_002935411|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]