SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301614203|gb|XP_002936570| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301614203|gb|XP_002936570|
Domain Number 1 Region: 189-431
Classification Level Classification E-value
Superfamily vWA-like 1.22e-68
Family Integrin A (or I) domain 0.000000772
Further Details:      
 
Domain Number 2 Region: 426-516
Classification Level Classification E-value
Superfamily Integrin domains 3.14e-20
Family Integrin domains 0.0012
Further Details:      
 
Domain Number 3 Region: 631-709
Classification Level Classification E-value
Superfamily Integrin beta tail domain 0.000000000000127
Family Integrin beta tail domain 0.0043
Further Details:      
 
Domain Number 4 Region: 89-145
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000022
Family Plexin repeat 0.0019
Further Details:      
 
Domain Number 5 Region: 589-629
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000893
Family Integrin beta EGF-like domains 0.0051
Further Details:      
 
Weak hits

Sequence:  gi|301614203|gb|XP_002936570|
Domain Number - Region: 552-585
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00558
Family Integrin beta EGF-like domains 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301614203|gb|XP_002936570|
Sequence length 782
Comment PREDICTED: integrin beta-2-like [Xenopus (Silurana) tropicalis]
Sequence
mgrkyggflqsgsaainailsadsasgkqeiqaweeesqawtwpviweyskralekdsdt
apeheemrwtylilvvqyvlfifpratskvctkfkvsncneciqsgpfcawckqpnftsa
gepdsvrcdtdevlgkrgckevdivyhdsrsvvkdrtrlsdrvqltpreislqlrpgkaa
efdvtfrraqgypvdlyylmdlsysmnddlqnvknlgsnllealnkittsaqigfgsfvd
ktvlpfvnthpeklknpcpernencqppfafkhilkltedgkqfqdqvgkqgisgnldap
eggldammqvavcgdkigwrnvtrllvyatddgfhiagdgklasilipndgqchlednly
krsnefvsvkrvwkkcnelsnlhklpaliqvlkeekknlsklipksvvgelssdsrnvvq
litdayqalssevildhgttpdfleilydslcpgdikenqlkgmcsnvkigeeikfkvkv
taskclqdqsfairplgftdtltvsvrtlcdcecdetprpgdcnsngtikcgicsqalfe
nkaekqnmamcmvnsvicsssltpgtcdcgvcrcnegyegsacqckrstsncknakgsvc
sgrgkcecnncickpgylqphcescpgcpspcskfgpcvecyinqedgstqncshlcpgv
kaerveelkretvckekdssncwmqyviveddgedkftitytlkrecpeapnfvaivggt
tagviligmacliiwkiiteikdrneynrfekerqnckwnqasnplyhkatttvqnpnfs
ge
Download sequence
Identical sequences gi|301614203|gb|XP_002936570|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]