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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301614657|gb|XP_002936802|

Domain assignment for gi|301614657|gb|XP_002936802| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301614657|gb|XP_002936802|
Domain Number 1 Region: 3225-3489
Classification Level Classification E-value
Superfamily YWTD domain 2.49e-54
Family YWTD domain 0.00000171
Further Details:      
 
Domain Number 2 Region: 1463-1725
Classification Level Classification E-value
Superfamily YWTD domain 1.44e-48
Family YWTD domain 0.00000467
Further Details:      
 
Domain Number 3 Region: 2415-2674
Classification Level Classification E-value
Superfamily YWTD domain 1.7e-46
Family YWTD domain 0.0000038
Further Details:      
 
Domain Number 4 Region: 422-683
Classification Level Classification E-value
Superfamily YWTD domain 6.28e-45
Family YWTD domain 0.00000991
Further Details:      
 
Domain Number 5 Region: 752-994
Classification Level Classification E-value
Superfamily YWTD domain 9.02e-41
Family YWTD domain 0.0000243
Further Details:      
 
Domain Number 6 Region: 1772-2035
Classification Level Classification E-value
Superfamily YWTD domain 5.36e-40
Family YWTD domain 0.0000368
Further Details:      
 
Domain Number 7 Region: 4081-4320
Classification Level Classification E-value
Superfamily YWTD domain 1.24e-38
Family YWTD domain 0.0000154
Further Details:      
 
Domain Number 8 Region: 2111-2362
Classification Level Classification E-value
Superfamily YWTD domain 3.66e-34
Family YWTD domain 0.0000469
Further Details:      
 
Domain Number 9 Region: 291-307,342-411,676-732
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.05e-17
Family Growth factor receptor domain 0.024
Further Details:      
 
Domain Number 10 Region: 2760-2802
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000034
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 11 Region: 58-93
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000393
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 12 Region: 3170-3218
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000231
Family EGF-type module 0.0085
Further Details:      
 
Domain Number 13 Region: 1291-1332
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000236
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 14 Region: 1132-1169
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000353
Family LDL receptor-like module 0.00071
Further Details:      
 
Domain Number 15 Region: 1091-1128
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000038
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 16 Region: 3653-3693
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000589
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 17 Region: 131-172
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000825
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 18 Region: 1172-1210
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000089
Family LDL receptor-like module 0.0009
Further Details:      
 
Domain Number 19 Region: 2883-2923
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000903
Family LDL receptor-like module 0.00095
Further Details:      
 
Domain Number 20 Region: 3052-3094
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000969
Family LDL receptor-like module 0.00093
Further Details:      
 
Domain Number 21 Region: 3012-3054
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000012
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 22 Region: 2927-2965
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000236
Family LDL receptor-like module 0.00056
Further Details:      
 
Domain Number 23 Region: 3823-3861
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000353
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 24 Region: 92-132
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000406
Family LDL receptor-like module 0.0007
Further Details:      
 
Domain Number 25 Region: 1048-1086
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000707
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 26 Region: 245-285
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000838
Family LDL receptor-like module 0.00088
Further Details:      
 
Domain Number 27 Region: 3866-3900
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000113
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 28 Region: 3572-3615
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 29 Region: 1255-1291
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000157
Family LDL receptor-like module 0.0007
Further Details:      
 
Domain Number 30 Region: 3536-3571
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000157
Family LDL receptor-like module 0.00098
Further Details:      
 
Domain Number 31 Region: 3747-3780
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000236
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 32 Region: 2725-2769
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000275
Family LDL receptor-like module 0.00074
Further Details:      
 
Domain Number 33 Region: 3611-3654
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000314
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 34 Region: 3951-3988
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000353
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 35 Region: 210-247
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 36 Region: 1379-1423
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000586
Family EGF-type module 0.0095
Further Details:      
 
Domain Number 37 Region: 3779-3819
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000759
Family LDL receptor-like module 0.00089
Further Details:      
 
Domain Number 38 Region: 2839-2885
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 39 Region: 1212-1250
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 40 Region: 2045-2093
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000275
Family EGF-type module 0.015
Further Details:      
 
Domain Number 41 Region: 1409-1455
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000406
Family EGF-type module 0.0036
Further Details:      
 
Domain Number 42 Region: 3100-3140
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000759
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 43 Region: 2969-3012
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000785
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 44 Region: 3908-3946
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000982
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 45 Region: 3137-3183
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000108
Family EGF-type module 0.011
Further Details:      
 
Domain Number 46 Region: 1336-1372
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000011
Family LDL receptor-like module 0.0026
Further Details:      
 
Domain Number 47 Region: 176-209
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000017
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 48 Region: 2808-2844
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000223
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 49 Region: 4033-4067
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000648
Family EGF-type module 0.011
Further Details:      
 
Domain Number 50 Region: 3707-3740
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000903
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 51 Region: 3995-4034
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000963
Family EGF-type module 0.0064
Further Details:      
 
Weak hits

Sequence:  gi|301614657|gb|XP_002936802|
Domain Number - Region: 1726-1768
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000218
Family EGF-type module 0.012
Further Details:      
 
Domain Number - Region: 1006-1053
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000598
Family EGF-type module 0.011
Further Details:      
 
Domain Number - Region: 2368-2411
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00385
Family EGF-type module 0.017
Further Details:      
 
Domain Number - Region: 3492-3524
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00907
Family EGF-type module 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301614657|gb|XP_002936802|
Sequence length 4553
Comment PREDICTED: low-density lipoprotein receptor-related protein 2-like [Xenopus (Silurana) tropicalis]
Sequence 
makyypdfqevnisdegrcyrldiqspspmpekehkithlllcssievlflldagegacs
sgsfrcsngrciplswrcdgtadctdnsdeagcpprtcstsqfrcgdgdcitsswvcdde
edcddgsdeqhcpgrtcsaqqftcssgqciprayrcdrmkdctdgadernclypvctels
cgsgacynrsqrcdgivdcrdssdesnctqrclssqfqcpsgeciprdflcdhdddcgde
sdeknctyptcrgdyftcsngrcihqtwlcdgdddcddngdewgcegghrecgpgewacp
ssgqcipvdkvcdgivhcrfgedesnitagrncstnncaslscqhrchsspagglcycpa
gyvissndsrtcidfddckmwgicdqfcedrigsyrcscaegyilehhkhcranstrgpp
siifsngrdlligdihggnsrilvqshnrgvavgvdfhfqlrrvfwtdtvqnkvfsvdid
gsnvrevlnisietpenlavdwvsnkiyvvetsikridmvdldgqnritliaedlgnprg
ialdpsvgylffsdwgsnseesklerafmdgtnrhdiiktklgwpagmtldiitkrlywv
dsrydyietttydgldrrtvvhggnviphpyglsifehylyftdwtkvsvmkankftdns
tqvvyrsssrpygvtvyhsarqpyvrnpcgtnnggceqicvlshrtdngglgyrcrcklg
fdlhedgrrcvvvrkfllfssqlavrgipfnlstqedviipitgvpsyfvgidfdaqdna
ifysdtvkdmiykqktdgtgkeiltanrvegvedlaydwisknlywtdpryrsisvmkla
dksrraiiqnlnnprsivvhpvigyifwtdwyrpakimrawcdgshlqpivnsslgwpng
lamdwsslrlywvdaffdkvehstfdgldrqtlnritqmthpfgltiyggyayitdwrlg
givrvrkydggemtiirrginnimhvksfdastqigsnycnrptnpngdcshfcypvpnl
qrvcgcpygmrlrpdqqtcfddpasepptmqcgsysfpcangkcvpvydrcdgvddchdn
sdeancgtrnntcssraftcgngqciplnwrcdshndcvdrsdeqncptqgprscsstsf
tcqnnrcipriwlcdtdndcgdgsdelncnftstcepgqfqcpdhrcidpsyvcdgdkdc
vdgsdemgctyncsysefkcasgdqcistgyqcdgvfdcndhsdelncptrpagmchqne
fqcqsdgacipsnwecdghpdcidgsdehntcpvrscppsmfrcdngnciyrswicdgdn
dcrdmsdekdcptppfrcpswqwqcpgnticinvskvcdntpdcpngadesplcnqesct
dnnagcthqciqgpfgaqctcpegyslsndsktcedinecltpgfcsqtcynergsyrcy
cedgyilepngrtckaagsanllllvasrnqiiadnittqahniypvirdgrtivaidfd
svtnrifwsdiaqdkiwsafvngtdrkvifdsgvtvtesiavdwvgrnlywtdyvletie
vsqldgthrtvlisenvtnprglvldprtdahvmfwtdwgrnprierasmdgkmrtvivs
nkiywpnglaidypnkrlyfadayldyidycdydgnnrkqamasdlvlqhphaitifedy
vywtdrytsrvirankfhggnqtvmiynihqplgisavhsvkqpggvnpcafnpcshicl
lssigpkfyscacpsgwtlvsdsvncqrdekpflvvvrdsiifgmslnpddktndamvpv
agirngydvdfddseqmiywienpgeihrvksdgtnrtvfapaaiigapvglaldwisgn
lyytnprtqsieviklrgevkhrktlitndgtqtgagapigiavdpargkmywtdqgidg
gtpakvasadmdgsnpsvlftnnldhiefitidtaeqklywtvtgtgmiergnmdgtnrv
tvvnhlshpwgiaiheaflyysdrdyeviervdkstgankvvmrdniqglkclrvhyrdn
sagssngcsnnpdacqqlcfpkpqgqfscscatgfkinadnrtcspyssfivvsmltaik
gfsleaadhseamvpmagrgrnalhvdvhmpsgyiywcdfsstpganngirrvkpngssf
rnivtggigrngirgiavdwvagnlyftnafltetfievlrlntsyrrvlmkttvdmprh
ivvdpknryifwadygqspkierafldctnrtvlvsegivtprglavdrtngyvywvdds
ldmiarvkseggeteivrygsryptpygitvfensiiwvdrnlkkifqaskepsnseqps
virdninllrdvtvfdsryqptspqelnnnpcfqnnggcshlcfalpgqqtrkcgcaygt
lasdgtrcvistddylifalegsirsllldpenhsppfppvnvfrtavaldydsldnrvy
ftqssgagrsrisyfslsspsgprttvasdlgapdgiafdwihkrvyysdylnqtinsma
vngsdrtviarvqrpraimldpcrgymywtdwgtnakieratlggnfrtaivntslvwpn
gltldyeeerlywadanlqkiercsltgtnrevvvstavypfamtlydqhiywtdwntrs
iyrankhdgsdqiimiqnlpqrpmdihvlsknkqqqcsspcdqfnggcshicapgpngae
cqcpasgrwylannnkdcivdngtrcengkftclngrciperhkcdndndcrdgsdeler
vcafhtcpstsftcgngrcvpyhyrcdhyndcgdnsdelgclfrtcdpnteftcnngrci
srayvcngvnncfdngtsderncpdrtcqpgytkcrstniciprtylcdgdndcgdmsde
spthcvtltctesefrcssgrcipghwycdqgvdcsdgsdepptcvahvrtcssdqfrcd
darcipaswicdgdndcgdmsdedqrhncanrscapteftcinnrpperrcipqswvcdg
dadcsdaydehqnctrrscsssefacanglcvrsnfrcdrrndcgdgsdergciyptcqq
qqftcqngrciskafvcdgdndcgdesdelehtcttseatcnphyfkcdnwiciaqgsvc
ngnddcgdnsdekacginecndpsisgcdhnctdtqtsffctcrpgyrlmsdkrtcddid
ecsetpsvcsqicentagsyickcapgyirepngrncrqnsninpylifsnryylrnlsl
dgqsyslilqglsivaaldfdrvesrlywidagrrviermflngtnketiinndipageg
lavdwigrkiywldsykdclnvadldgrfrkklidrcidanntfcfqypraivvhpkkgy
vywtdwadkpfigragmdgknktviistkiewpngltidytndmlywadahlnyieysdl
dgrhrhtvydgnlphpfaitvfedniywtdwntrtvekgnkydgsgrtmlantthrpfdi
hvyhpyrqpitnnpcgrnnggcshlclikeggqgytcecpdhflavqfgsvvrclpacss
tqflcadsercipiwwkcdgqrdcrdgsdepatcpqrycrvgqfqcndgnctssyfmcns
ypdcpdgsdedqilcanhqcdthqwqcankrcipeswqcdqeddcgdnsdedsahcstrt
cnpgqfrcnngrcipqswkcdvdddcgdhsdepfqecmgpayrcdnhtdfdcrtnyrcvp
mwsvcngyddcrdnsdeqgceqrtcdprgdfrcdnhrciplrwkcdgdndcndgsdernc
sprectesefrcdnlrcipgrwicdhdndcednsderdceirtchpgyfqcnsghciaer
frcdgtadcldvsdeaacptrypngtycpasmfecknhvciqpywrcdgdndcgdgsdee
lqhcldipceppfrfrcgnnrcvyrheicngvddcsdgsdeteeqcrpptprpctdeeyk
cgnhfcvplhyvcddyddcgdhsdeagcnrgtqrscsenicehnctnlseggficscrpg
ykasesdrnscedinecelyrkcpqdcknskgsyecfcaegyrsvgdqqgtqcaaegtpp
llllpdnvrirrynlsseqysdyiedqqhvqaldydwdpegiglsvvyysirgqgstfgs
irraylptfedygnnlvkdvdldlryignpdglavdwvgrhiywtdagtnrievakldgr
yrkwliytqidqpaaivvnpelgfmywtdwgrqpkiecawmdgqqrqvlvsedlgwptgl
tidyinknriywsdskeniiesikpdgtdrqtvitgdlgnpysldvfeghlywttkekga
avavlltvilviiigslviggifnyrrtgkllpslpkfpslsglvkssengngvtfrsgt
dvsmdigvsgfgadsaidrvmqmnetftvdtgkeptvyenpmyttsegaavvtisrppdv
tninnngqgadnfenplyavdtpqssgslettqpeskwnffkrkikqstnfenpvyaeme
keqqneaeedpspftsqppekssnkkeqqpssysptedtfkdtanlvkedsdv
Download sequence
Identical sequences gi|301614657|gb|XP_002936802|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.