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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301615896|gb|XP_002937402|

Domain assignment for gi|301615896|gb|XP_002937402| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301615896|gb|XP_002937402|
Domain Number 1 Region: 1295-1560
Classification Level Classification E-value
Superfamily YWTD domain 3.4e-50
Family YWTD domain 0.00000183
Further Details:      
 
Domain Number 2 Region: 562-828
Classification Level Classification E-value
Superfamily YWTD domain 5.49e-47
Family YWTD domain 0.00000684
Further Details:      
 
Domain Number 3 Region: 1839-2084
Classification Level Classification E-value
Superfamily YWTD domain 1.05e-45
Family YWTD domain 0.0000218
Further Details:      
 
Domain Number 4 Region: 240-503
Classification Level Classification E-value
Superfamily YWTD domain 1.01e-42
Family YWTD domain 0.0000802
Further Details:      
 
Domain Number 5 Region: 2147-2416
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-32
Family YWTD domain 0.0000835
Further Details:      
 
Domain Number 6 Region: 1606-1791
Classification Level Classification E-value
Superfamily YWTD domain 8.37e-30
Family YWTD domain 0.00016
Further Details:      
 
Domain Number 7 Region: 2886-2966,3165-3220
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.49e-22
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 8 Region: 2974-3172
Classification Level Classification E-value
Superfamily YWTD domain 4.32e-20
Family YWTD domain 0.00025
Further Details:      
 
Domain Number 9 Region: 138-230,505-553
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.73e-17
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 10 Region: 1198-1287,1553-1608
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000008
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 11 Region: 912-957
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000942
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 12 Region: 1040-1075
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00025
Further Details:      
 
Domain Number 13 Region: 956-995
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 14 Region: 2639-2675
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000262
Family LDL receptor-like module 0.00075
Further Details:      
 
Domain Number 15 Region: 2849-2890
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000563
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 16 Region: 2718-2754
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000812
Family LDL receptor-like module 0.00086
Further Details:      
 
Domain Number 17 Region: 1087-1123
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000838
Family LDL receptor-like module 0.00088
Further Details:      
 
Domain Number 18 Region: 877-911
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000011
Family LDL receptor-like module 0.00068
Further Details:      
 
Domain Number 19 Region: 2761-2795
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 20 Region: 1001-1038
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000038
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 21 Region: 2545-2584
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000524
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 22 Region: 1793-1843
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000115
Family EGF-type module 0.012
Further Details:      
 
Domain Number 23 Region: 2678-2720
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000127
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 24 Region: 2504-2545
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000209
Family LDL receptor-like module 0.0026
Further Details:      
 
Domain Number 25 Region: 66-105
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000353
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 26 Region: 2598-2634
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000615
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 27 Region: 2798-2838
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000759
Family LDL receptor-like module 0.00071
Further Details:      
 
Domain Number 28 Region: 2469-2506
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000249
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 29 Region: 1169-1205
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000367
Family LDL receptor-like module 0.0026
Further Details:      
 
Domain Number 30 Region: 1134-1166
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000432
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 31 Region: 110-145
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000694
Family LDL receptor-like module 0.0029
Further Details:      
 
Domain Number 32 Region: 2103-2152
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000017
Family EGF-type module 0.014
Further Details:      
 
Domain Number 33 Region: 833-873
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000964
Family EGF-type module 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301615896|gb|XP_002937402|
Sequence length 3233
Comment PREDICTED: low-density lipoprotein receptor-related protein 1B-like [Xenopus (Silurana) tropicalis]
Sequence 
maqgenssnfpplqfpagraedktfkngfpltfmvqssllcrcafndgfrsvspyvcsfa
aaeqqlcdpgeylchdnvtcvsqswlcdgepdcpdnsdesvdtchekivfkcprnhvact
gtkncihysklcngvydctdgydegahcrelqttcqkrncqykcaimrngtecycrdgye
tgpdgrtckdidecaaygscsqtcrntlgsytcsciegyliqsdnksckaknepadrppv
lliansetievldinggkaptrssmnangihtlgfiydenkvcwietkkptnqlkcykit
ktgtftderiiqlsqflnnvhqmavdwltgnyyfvddgndrifvcnhngtvcitlidldl
hnpkaiavdatagklfftdygtvakvercdldgmnrtrivvskieqptaltldlvnkfvy
wadvyldyievvdyegrnrqsiiqgkevshvyglslfenylyasntdsstivrinrfnst
dvhsllslenvrdihiyhkrtqpavrsyacemnpdgmpggcdhicllgssfkmrtcrckt
gfslasdgrsckkpknelfliygkgrpgiiramdlnskvsdeymlpienlvnpraldyha
etnyiyfadttsfligrqkidgsgretilkddldnvegiavdwisnnlywtndghrktin
varlekasqsrktllegemshprgivmdpvngwmywtdweedeiddsvgriekawmdgse
rqifvtsnmlwpnglsldhensilywcdafydhieqiylngtlrkvvgsgkelnhpfgls
hhghslfwtdymngsifqldlrnknitllrqerpplfglqiydpkkqqgdnacrlnnggc
gtlclaipggrvcgcadnqhldennstcvfnveeklpqlcnseefqcknyrciqeswkcd
geddcldgsdedfenclnhscpndqfkcrsnrcipkrwlcdgandcgsnedesnetclar
tcqphqyscnngrcislswicdqeddcgdrsdemascefktcepdtqfvcgngrcisnkw
hcdsdddcgdgsdesgcslsctdkqfrcssgrcipahwvcdgdndcgdfsdethancsrt
vspvsgaceakqfqchpdgncipelwlcdgekdcedgsdergcngtlrqcdaktkfackn
tgrcisnawvcdgdidcedhsdedycegyicgppkypcandtsiclqpeklcngrrdcpd
gsdegdicdecslnnggcshqciiapgrgivcscpqgmhlgtdnktceqvdyctkhtkcs
qvceqhkqvvkcscyegwvlntdgetcssvdtfeafiifsirheirridlhrrdysllvp
glrntialdfhfnqsllywtdvvedkiyrgklsetsgvsgievviqhglatpeglaidwi
agniywidsnldqievakldgkmrstliaggmehpraialdprygilfwtdwdatfprie
sasmsgagrkiiykdmesgawpngltvdhferrilwtdarsdaiysalydgtamkeiirg
heylshpfavslygsdvywtdwrtntlskankwtghnvsviqktsaqpfdieiyhpsrqp
qapnpcasengkgpcshlclinfnrtaacacphlmklssdkktcydihsirglavdwlsr
nlywisseydetqinvarmdgslktsvihgidkaqslavhpirgkifwmdgnsinmanmd
gsnskilfqnqkepiglsidygdnklywissgnatinrcsldgsnleviesmkselskpt
altivdnklwwadqnlgqigtcnkrdgrnpsvmrnktlgvmhmklydkeaqqgsnpcqin
nggcsqlclptsettrtcmctvgynlkknrmscqgiesflmysvhegirgipldpsdrmd
almpisgtsfavgidfhagndsiywtdmglnrisrsrrdqtwkedimtnglgrvegiaid
wiagniywadhgfnvievarlngsfrfvvlsrgidqpraiavhpekgylfwtewgqtpci
srarldgsertvlvntaiswpngisvdyeenklywcdartdkieridlesgrnreivlsg
snvdmfsvvvfgayiywsdrahsngsirrahkndatdavtmrtglginlkdvkvfnrare
kgtnicaknnggcqqlclyrgnmqrtcacahgylakngvtclkhegyllysgrtilksih
lsdetnlnspiqpyenpdffknvislafdynsnekgpnrifysdahfgniqlinddwtgr
kviienvgsveglayhrawdtlywtssttssitrhtvdqsrrgafnreavitmseddhph
vlaldecqnlmfwtnwneqhpsimrstlsgqnaqvivstdivtpngltidhpaeklyysd
gslgkierceydgshrhvivrsgpgtffslaihndyifwsdwvrrailrsnkytggetkv
lrsdiphqpmgiiavtndtntcklspcsymnggchdlclitpdgrincscrgdrvlvndn
rcvsknsscnmfsefecangecieyhqtcdgivhckdrsdekqsycenrscwrgfrlcgn
hrcipnnkvcndeddcgdnsdeldckistcastefrctdgtcitksaqcnqiidcadasd
ekncnntdcthyyklgvktagfircnstslcilpewicdgandcgdysdelkcpaqnkqk
ceenyfecqngrcisnawvcdgqrdcedgrdelhcdtscswsqfacsknkciskqwvcdg
eddcgngldeseelcgsvtcaagffscpgshacvpshwlcdgerdcpngsdelstadcap
vttcdenafmcnnkvcipkqfmcdldddcgdgsdeslecgyhqcgpeefscadgrcllns
hwqcdgdfdcadhsdeaplnkkcrnteqscnsssfmckngkcvpkgalcdtrddcgdgsd
ergchvneclskrvsgcsqdcqdlpvgykckcwpgfrlkndgktcvdideclsgfpcsqq
cintygtykclcadgyqihpeypngckslseedpfllladhheirkmstdglnytmlkqg
lnnviamdfdyreeviywidssrsngsrvnrmfvngsdvkhtyrylywidcceyphvgrv
gmdgtnqsvvietmisrpmaltidyvnkriywanenhiefsdmngsnrhkvpyqdvqgvi
altlfedyiywtdgktkslnrahktsgenkaslinswhaisdieiyhayrqpdvpdhpck
mnngdcshlcllspqkshtcacptnfylaedkktclsnctasqvcqssrvmsd
Download sequence
Identical sequences gi|301615896|gb|XP_002937402|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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