SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301618279|gb|XP_002938549| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301618279|gb|XP_002938549|
Domain Number 1 Region: 1215-1517
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 1.02e-87
Family Complement components 0.0000262
Further Details:      
 
Domain Number 2 Region: 1589-1717
Classification Level Classification E-value
Superfamily Alpha-macroglobulin receptor domain 1.26e-35
Family Alpha-macroglobulin receptor domain 0.0000202
Further Details:      
 
Domain Number 3 Region: 1045-1164
Classification Level Classification E-value
Superfamily E set domains 5.32e-23
Family SVA-like 0.034
Further Details:      
 
Weak hits

Sequence:  gi|301618279|gb|XP_002938549|
Domain Number - Region: 635-689
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.0051
Family Invasin/intimin cell-adhesion fragments 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301618279|gb|XP_002938549|
Sequence length 1727
Comment PREDICTED: alpha-2-macroglobulin-like [Xenopus (Silurana) tropicalis]
Sequence
marqekeeqhqiaisayqknsrkehqrilarrqtikerkerlenlniqrekeemeqkeae
lqkvrkaeeerlrqeakgrekerilqeheqikkktnleeldpdfimakqveqlekekkel
qerlknqekvrcsggsvspqevhngspgygaptelyilesmlattvilcvvqglglpksp
megrtgggrrklssggcdsvcqtseepnggedwgreeetefnnsilrmfatlvgvyfigs
ffyrrfivgargmeqipnlvlwqpkrparnmwscaltlcllltafpggdpappdpqylll
vptvlhgaseekfclllshlnetvtmtltlylptqnhtllekqvtekeedgcvtfmtpkl
evaavailtldvqgdalhfksqrkilikplqnpvfiqtdkpiykpgqkvqfriasldenf
hpvsekfpavyitdpqgnrisqwlnvelkkgltqesfqlsseptlgiykltvgreksapv
thsfsveeyvlpkyevqvklppvvgimdkgikvtvcgrytygkpvlgrikvrvcrkfsdr
ynlckgeedgvceeinhragpngcfsevvstrmfqmrrsgyedkirasatiiedgtgvel
taavsseikktlakvsfrhldshyrkglplfgqlfledasgnpmanetvvifvgygtnft
yttgqdgtaeflidtsnvqksslqirarykegescyqyrwvsvsyqgdersvkefysrak
sylkiqpiykilecqkqekvivhfilsaegvgettnavfhylvmskggiaghgrheieis
pnqnasgtfwfrltagtdiapsanflvylilesgeviadsislkvekcfgnkvelsfsps
ealpgapadlhlltapsslcalravdesvlilkpeaelsaqtiynllplqdlsgyihdgn
fleelwddpcikmeplfingiyymptnpewdtdtytilknlglkvftnarirpplvcgpr
tgmgvqagmsgaglhigrnipvaepvietvrkyfpetwlwqlvetdadgkadlavtvpdt
ittwkagmfctsqgagfglsetislvafqpffleltlpysairgeiftlkatvfnylsqt
irvgilledsnqflakptkvqedgycvtangqvtlswevtlkslgevnftmsaetlngeg
lceneivspaqgrkdtitkhiivepegvkkeethstmicgkgseiteniplklpekvveg
sarayfsavgdilgtamqnlgnlvqmpygcgeqnmvlftpiiyiseylnktnqltpemks
ktlsymstgyqkqlsykhpdgsysafgqrygegntwltaftmksfararahiyieeklit
gallwlsirqkpngcfhsvgklfnnamkggvddevtlaayitialleyplpvthptvrna
lfclesalggkngiytkalmayaftlagrmdirrqllqsldeqaikkdgtvhlhrpefsd
dsgvdrfpyrrapsaevemnsymllallskhnvsdedltlatqvvswmikqqnpnggfss
tqdtvvalqalslygsltlshdamrtvslsldktpvaefhvedsnrlllqrialkevpgd
ylatvsgsgclylqttlrynvpipkedapftisvttdpetcdrkslktftivanvsyvgk
rlnsnmavvevklpsgyipikpsvkkmtasnrliqraeahanevivyfeslfkdiqsfrf
sveqeipignlqpatvvvydyyetddlaitkydapcsakdgankeqq
Download sequence
Identical sequences gi|301618279|gb|XP_002938549|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]