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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301619895|gb|XP_002939321|

Domain assignment for gi|301619895|gb|XP_002939321| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301619895|gb|XP_002939321|
Domain Number 1 Region: 4258-4432
Classification Level Classification E-value
Superfamily Fibronectin type III 3.59e-34
Family Fibronectin type III 0.002
Further Details:      
 
Domain Number 2 Region: 3492-3675
Classification Level Classification E-value
Superfamily Fibronectin type III 4.3e-33
Family Fibronectin type III 0.0018
Further Details:      
 
Domain Number 3 Region: 2043-2230
Classification Level Classification E-value
Superfamily Fibronectin type III 1.45e-32
Family Fibronectin type III 0.0029
Further Details:      
 
Domain Number 4 Region: 3777-3968
Classification Level Classification E-value
Superfamily Fibronectin type III 2.59e-32
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 5 Region: 2433-2580
Classification Level Classification E-value
Superfamily Fibronectin type III 2.81e-30
Family Fibronectin type III 0.0034
Further Details:      
 
Domain Number 6 Region: 4058-4258
Classification Level Classification E-value
Superfamily Fibronectin type III 4.21e-30
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 7 Region: 1432-1595
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.63e-28
Family Laminin G-like module 0.0045
Further Details:      
 
Domain Number 8 Region: 1863-2039
Classification Level Classification E-value
Superfamily Fibronectin type III 2.05e-27
Family Fibronectin type III 0.003
Further Details:      
 
Domain Number 9 Region: 1611-1794
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.19e-26
Family Laminin G-like module 0.0075
Further Details:      
 
Domain Number 10 Region: 970-1157
Classification Level Classification E-value
Superfamily Fibronectin type III 3.71e-26
Family Fibronectin type III 0.0026
Further Details:      
 
Domain Number 11 Region: 2237-2435
Classification Level Classification E-value
Superfamily Fibronectin type III 4.81e-26
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 12 Region: 2829-2994
Classification Level Classification E-value
Superfamily Fibronectin type III 6.21e-24
Family Fibronectin type III 0.0028
Further Details:      
 
Domain Number 13 Region: 1157-1202,1234-1320
Classification Level Classification E-value
Superfamily Fibronectin type III 4.22e-23
Family Fibronectin type III 0.0043
Further Details:      
 
Domain Number 14 Region: 2590-2719
Classification Level Classification E-value
Superfamily Fibronectin type III 2.13e-22
Family Fibronectin type III 0.0023
Further Details:      
 
Domain Number 15 Region: 3355-3481
Classification Level Classification E-value
Superfamily Fibronectin type III 3.16e-17
Family Fibronectin type III 0.0044
Further Details:      
 
Domain Number 16 Region: 4639-4748
Classification Level Classification E-value
Superfamily Fibronectin type III 6.85e-17
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 17 Region: 2714-2822
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000121
Family Fibronectin type III 0.0034
Further Details:      
 
Domain Number 18 Region: 4431-4556
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000106
Family Fibronectin type III 0.0049
Further Details:      
 
Domain Number 19 Region: 1374-1437,1807-1858
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000211
Family Fibronectin type III 0.005
Further Details:      
 
Domain Number 20 Region: 121-272
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.00000000000528
Family Clostridium neurotoxins, the second last domain 0.054
Further Details:      
 
Domain Number 21 Region: 3963-4045
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000607
Family Fibronectin type III 0.0033
Further Details:      
 
Domain Number 22 Region: 3666-3773
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000746
Family Fibronectin type III 0.004
Further Details:      
 
Domain Number 23 Region: 763-813
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000474
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 24 Region: 713-760
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000977
Family Laminin-type module 0.0096
Further Details:      
 
Domain Number 25 Region: 665-715
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000014
Family Laminin-type module 0.0053
Further Details:      
 
Domain Number 26 Region: 559-609
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000273
Family Laminin-type module 0.0064
Further Details:      
 
Domain Number 27 Region: 918-966
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000167
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 28 Region: 816-857
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000187
Family Laminin-type module 0.0056
Further Details:      
 
Domain Number 29 Region: 493-546
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000204
Family Laminin-type module 0.032
Further Details:      
 
Domain Number 30 Region: 612-655
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000419
Family Laminin-type module 0.022
Further Details:      
 
Weak hits

Sequence:  gi|301619895|gb|XP_002939321|
Domain Number - Region: 2996-3056
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000133
Family Fibronectin type III 0.0043
Further Details:      
 
Domain Number - Region: 867-910
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00131
Family Laminin-type module 0.014
Further Details:      
 
Domain Number - Region: 436-490
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00276
Family Laminin-type module 0.053
Further Details:      
 
Domain Number - Region: 4523-4625
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0346
Family Fibronectin type III 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301619895|gb|XP_002939321|
Sequence length 5022
Comment PREDICTED: Usherin-like [Xenopus (Silurana) tropicalis]
Sequence 
mlldslkpillccyiyipivssqgrfpklenigafkpitttpaeatcgspersvfcqsdi
hiktiqtctqrlciqecphrsktpthrqllqsglsncvkldqndlrpstkgnatsfifyd
hrdcfvapstprtgtsftltvwvnperegvmcvieksadgqivfkltiseketafyyrti
nglqppvkvmtqgrflgkkwihltvqvhhikinffmdgleddgkafasrllndpildddn
ssillgqtyngseqfvgrmqdfraypvaltnrllvngrilitelstgryqftyrftvfyv
iiqfysplpqtlkiqkkkdrdslwedwqyfakdcqyfemenngvlkfpdsvncqqipkha
pfsrgnvtlsvltpepnhrpgyndfyntqslqefvkvsqlrihlmgqyysegseaeavpy
rhryygineitisgrcncnghadycdqsvtpyrclcdinshtygancdrclplfndkafh
qgdqvnayncrlcqcnnhatkchynatldpyphdhdqggggvcedcshnttgqhcqlcke
hfyrgagddpaaidvckpcacneagamgknipcqqiggqckckmyvfgrqcdqcmdgyyn
ltksqaegclpcrcsssgtrigdvtcdqysgqckckpnftglqcdrcnlgfklqntfgee
scvpclcntygsinqfcnpisgqckckvdvkgllcnkcpdnyygpdalgckqcdcnqdgi
ipgticdvetgqcackpniggrqcnecvdgyykvqlknsclpcdcdvsgtinhsqycdks
tgqcfckpfvtgqkcnicmshkynlsifnllgcqdcdcdplgtlvgtqcdpisgqckclp
nnqgrrcnqckkgfylsnaqgegcipcschpkasynetctdlngqcychdfsvtgqkcde
ckdfffgfdpetgrcetcdcdlagaisgscdsltgqcyckmfvrglrcnqcmedsggldf
qnpfgcsktpyqqpppngyilnstsialswnppdspnsnrityelyrdgyqisqlmdfyp
ygaqtfvdnsllpytfysyhivtsnvygstssdkvtyrtkagapvgdiylyhfsttfpps
vylnwtltsndsgpietfrltqstadehkviyegpgnsvtlynlspftkylfsvqactte
gcllslpvpvvtpqapplyqsppslhncsstyiflhwsppsqangiviayelymrgltet
tgnptpperrvfhttgwlnpqpvvesenenallppatgttvanlepnteyefcivatnma
gstasewvtlktaeseplsmpapsilpltshslnvtwvkpnnsaargditgytinvseed
vtnkdgmfevlyvaedhelfhvatglkpyrsysftitlcnkvgcvtsvpgvgktlaaapy
klnaplvhginsttmkvswappvflngpsptyqleridpaltitsatnfikgtrfpgagy
fkfppstlpmntyftgiklqfrtkepdglilcaasagmqeefvalqisngrpyflfdpqg
savavsptndggrvyndnnwheiiavrnqangtitvdglytgsssatsgstiigemtgif
vgttqinrkhfvgclgavyiqrsgnpldiwealdwdeaeeknnvydkwegcpetseegah
flgfgflelypfvfprgpnfeisfmfktdqlkglllfiynndgpdyfmvqlhngilsami
rtqssllqlnlwaglsycdgrwnkvhikkehtlfllqlnnlvdkveeldnlrmeirvnsa
vyiggvpehvqdsfpdldlqqgfggcmkemqltegfvnfatathdavrvnldgclltdss
vscrgndsiivyggesqevydnelqpfteylyrviasneagseasswsrgrtkaavpqhv
nvdlramhisgysvgvtwtrptgvkgiieeyilkaypehspnvsavtatfpdasnlpgtl
kgllpfskyavtlslctlagcsemptvlristlqevpeevqppiaepfpyslhlhwlepr
kpngiitqyilhmngtqiyigngtehnvtaltaftpcyflltactligctnssqitifta
qlppdfvsppiltvldatkifvrwreprrsnglleryilhitsnpknrscwqviynssel
fldytiqnlipgtkyfiklsactqggcttsnisvamteesspggvqtptiqsyspeslni
swlkplhpngiitsyalymdgilaqnssdlsyfvdglspwskhsfqlrvctakgctlskk
vdaytqesqpegnvllhviidgprgvqikwqgpgkpngqityavifngtfytnedggetf
pvvngpnilhrsqesnrwvfisglvpylnysiyinasnskgyvisdpilvtmppaapdgv
lpprlssatptslqvvwstparnnapglpnyrlqmsslnptneiielysgpsasiiylin
dlqpftpydlriiasnaygetksnwttmftkqdkpgtidppvltdvqsrsinitwqpphk
pngiithyniyqngrkqvsvsgnsssytmlqldpftkyqfqiegctsegcslslvsfgvq
tcpdapsdipppalhsdtptsvviqwqpplhpngiienfqierrikgvekinslitlpgd
hqmkhvdktsdispwtlyeyrvraatinggantsswaevrtrpsrpagmqapnvtvlgpy
takvtwrsplvpngeilsyeirmpepriaiinatllshtvtnlipdtnysvtivactggg
syhggcseslptnvtthptipqgispilvtpisetfvvvswqppsqpngphlryellrrk
ilqplasnppedlnlwqniysgtqwfyedkglsryttyeyrlivhnevgytlgtdvnvtt
magrpirgsdvtavainhtaievkwsrptlqdlqgavelytlvikspksnesltlqasdn
ymaigglhpntkyqlylqtfngahsingdsvdvqtldgepegisppevavinstavrviw
tppsnpngivteysiyvnnqiykaqlkspnpfvvggllpfkvykiqvgvctvyacvksna
tqtataerpprgipqpevivtsarsvqiewsspeepngiilgfalwrqtlhpcssaeklw
ihgfkscsylkcqkhedicgdlcynpinqecckgvlhnrlsgyecceekymgsgqnssli
ccgdqkyvvqpehqccggyytrvkagevccydmlqnrvavgqgdsccngmpfsssgsqvc
cgnalqdgfnqqccggtmmgndficcgdkengsiyhpstgmiccgteyvnssestcclgs
ngkfkvhfrprnqaqlkcceteliseekeccnglgydpsvyvcssrlpqelpteeetchs
rvlcpismlftaycgqchfnpntescflrkglgnqygninkkedgfcasegediiytgda
ntysftdttvdpfttyeyriytwnsvghgfsnvskvttkqdkpqgvrpprwtkvdnredm
ifltwrepymsngidyyvllrdgaerykgteqsfqdrrgispfkeyiyqlkactlagcsl
srkvfaalkqgvpqnvlpptitpvnstalhlswstpqkpngiireyqvllvatgiiyscs
aerkhytvtglkpftsysftltgcssagcnssepasgqtlqdapqgvwsnpyhvtinesv
lelywsepetpngivsqyrlilngevislrsgeclnftdvglqpnsrysyqleasteags
tksgiyvvqtpsatpakipapynvsvlgpfsiyvawdapgefdsgrpleynillntglpd
sqvhpaggepflileelnayteydvrvqacqhgncgvgprvstrtdeappegldcphmva
vgpetikidwrppvkpngiitsyfiyrrpadsdeellvhrcldgileytdstngllphta
yeycvraenprgsvqsvwsliytleaapeeleppsvivtgaysvfltwnppaypngiiny
yhviyeefpgeqgfsssaertltfqgttyqtmvfgllpattygfhieasntaskasstst
laqtmeaspsglsnftveknengkalllkwqapertngkiqmynvfcdgnieysglshqf
ffqrlqsytnytlvleactaagctrafpqlaqteeafpasqlppsihfvnsshvelywsp
pmypngqlkqynvikrwspegpsenkdnmnekivhterntsseiytyvdgglhpwteyey
kirvwnsvaytdsswslvrtsqaaprrlpppklfhvennphqlviqwsqpeeengiilsy
rlqrnnisfhftfdsetftyidegllahtkysysitactlggcttsdaahiqtleaapal
vyppevksvssteinvtwssplltngeiskyiiqmdkdkyfvgkklstlvsnlqpftqyn
isllactnggctsslttsfrtmeapplemkaptynvtgpssinltwespdkpngqirkye
lrrddlviyvgqdtkyhdfgltpgmeysyavqadnnegnitspsvkikthpsspsdlepp
eiqalsaheilvswrpplkpngdiinytlsircplematkkyhldnsltsqsrqsfilwa
vnsagrtpslwiycrtgpappegilaptfdtvtstqavakipppstpngivtlyrffsgx
xxxxxxxxxxxxxxxxqniwlpsnlhllfplgrnfplsegtsnvqvlyglrpftnysvga
evctclkccsrgpmvqlatqpappshqlpprvthatsrsasfewkepespngiiegyevh
mqtpcpqpaqvvpcirgapeikcrgiekecnvtdlqpythysvqvishnavgsaasewis
cvtnkenptynrnvhvssnittifldwslsfqlngdlkefvltergqrlysgfdssiylq
rtmdktlffevtcttdvgkvsspiikynsatglapaqpfpsakngtdsrgntfytelwfi
ilmaltgllllaiflslvlrkkinkqayprerpplvpvqprmspasaytqhetyakhsls
dsqhvllpdsilkvpttshegeteekgivelkvseleahtgpntpsvvrkashvshsfsq
nslyrsasqlihshhkkslvesslwdsalqghdsgmflspcp
Download sequence
Identical sequences gi|301619895|gb|XP_002939321|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.