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Domain assignment for gi|301621371|gb|XP_002940020| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301621371|gb|XP_002940020|
Domain Number 1 Region: 129-370
Classification Level Classification E-value
Superfamily vWA-like 1.14e-69
Family Integrin A (or I) domain 0.00000179
Further Details:      
 
Domain Number 2 Region: 1130-1313
Classification Level Classification E-value
Superfamily Fibronectin type III 1.44e-38
Family Fibronectin type III 0.0000124
Further Details:      
 
Domain Number 3 Region: 1538-1738
Classification Level Classification E-value
Superfamily Fibronectin type III 6.9e-32
Family Fibronectin type III 0.0011
Further Details:      
 
Domain Number 4 Region: 994-1112
Classification Level Classification E-value
Superfamily CalX-like 6.41e-17
Family CalX-beta domain 0.0015
Further Details:      
 
Domain Number 5 Region: 631-715
Classification Level Classification E-value
Superfamily Integrin beta tail domain 2.48e-16
Family Integrin beta tail domain 0.0017
Further Details:      
 
Domain Number 6 Region: 30-80
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000837
Family Plexin repeat 0.0015
Further Details:      
 
Domain Number 7 Region: 545-582
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000053
Family Integrin beta EGF-like domains 0.032
Further Details:      
 
Domain Number 8 Region: 586-623
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000949
Family Integrin beta EGF-like domains 0.014
Further Details:      
 
Weak hits

Sequence:  gi|301621371|gb|XP_002940020|
Domain Number - Region: 505-545
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00193
Family Integrin beta EGF-like domains 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301621371|gb|XP_002940020|
Sequence length 1835
Comment PREDICTED: integrin beta-4-like [Xenopus (Silurana) tropicalis]
Sequence
mmnprvlggllllvlllglpashsqsnkynpcvasratscsaciraykdcsycadegfas
vrcdlaenlrrygcsergivymrsevltqqsydintlvsktqvapqrmsmrlrageetsf
dlnvfepldtpvdlyilmdfshsmsddlanlknmgqelanvvstlsknytigfgkfvdkv
tvpqtdmrpeklkqpwldstppfsfknviqltsdvgkfrnelmkekisgnldppeggfda
ilqtavctnqigwrkgsthllvfstesafhyeadgmnvldgilkrndeqchldasgyyth
divqdypsvptlvrllaknniipifavtnysysyydklskyfkvseigelkedssnivel
lqeaftqirsrmdirddntpramdvsvtsetakvtetgsfqvtrgevgtfkvkvkalerl
gnqhvcelppqdqgsqillkpstftdglkidaslicdscpcelqkelsspkcsfngdfvc
grcecrerwrgvycncsstdtkstqscispgsteicsgrgeclcgtcqchsesptqqyqg
efcqfnnfqcprflgymcndrgrchmgacvcdagwegescqcptsnqtcldrngglcssr
gkcvcgrcqcdnvsqytdatcefsyslrqlgvcedlrtcvqcqawgtgekkgtqceacei
kikmvdelkkvdersenctfrdetddctyeysvdphavqgnytvlvknkkecppgaflwl
iplliflmlllglllllcwkycacckaclamlpccgpgrtvgfkedhymlrqslmssdyl
ntplvrsgslkggdtvrwkidnnvhrqppapgtlnpkelvpygvslrlarlftenlskpq
srectqlrqevedslnevykvipgthkvkqtafrlqsnagkrqdhtiaetilmapreaep
eivkvtekhvtqeafqdmkvapgyytvtsdrdahglvefqegvelvdvrvplfireeddd
ekqllvealdvpsgiarlgrklvnitiikeqaksivtfvkpaytysrqeqvarvpvsrei
iqngktqvtyrskdltaregkdytfsegeltfqpddtqseilvpilgrsevdtllgnkqv
kqfllelsnpkygakigkypqctitiddtadviqktmtvqsvqsprgkvgapinlnaqal
sarkirlnwmpppgkptgykvrywiqgdsesdatvvdtnvpsaelvnlypycdyemrvca
ynaqeegpftdivtcqtleeapsepgrlafnvisstvtqlswaepaetngeitayevtyg
mvnednkpigptkkvlindskkrmvlienlresqpyrytvracnkagwgperdatmnlat
qptrpmsipiipdapiidaeageeydsylmystdvlrspvgskrpsvsdesgqrwkyvpl
lgsemdlrrvtwklpveviprlsvssglstdneslldqplttssltrkgtmratpeeqli
ngrtefsfsggslnrsmvsgyqqlsphvqnesyrfgssssqhtsttvisgqgssgqnrlg
lpplvlgggrgrthsedvrdaltsldvaiqdtrlspgipdtptrlvfsalgptslkvswq
epqcerevlgykvhyqllhggelrtiditnprensvvvedllpnhsymfrvkaqsvegwg
peregvitiesqvdpqsplspvpgspftlstpsapgplvftalapdslqlswvrprkpng
tilgymitcemlhgggeprtiyvegdkpetsltvpflnenlpykfkvqakttqgfgpere
giitiesqdggnfsqfgtqqitrrevfnmpgeytqssitqsnitepffsdgmsvttrrie
gsntvtqqvtkefvtrtmmsggslnrqverqfyda
Download sequence
Identical sequences gi|301621371|gb|XP_002940020| XP_002940020.1.99540 XP_017953361.1.99540

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