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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301623207|gb|XP_002940911|

Domain assignment for gi|301623207|gb|XP_002940911| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301623207|gb|XP_002940911|
Domain Number 1 Region: 3813-4012
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.22e-38
Family Laminin G-like module 0.0043
Further Details:      
 
Domain Number 2 Region: 3224-3328
Classification Level Classification E-value
Superfamily Cadherin-like 1.31e-31
Family Cadherin 0.00062
Further Details:      
 
Domain Number 3 Region: 1551-1674
Classification Level Classification E-value
Superfamily Cadherin-like 2.57e-30
Family Cadherin 0.00061
Further Details:      
 
Domain Number 4 Region: 3330-3441
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-30
Family Cadherin 0.0007
Further Details:      
 
Domain Number 5 Region: 3120-3223
Classification Level Classification E-value
Superfamily Cadherin-like 3.57e-30
Family Cadherin 0.00048
Further Details:      
 
Domain Number 6 Region: 2803-2911
Classification Level Classification E-value
Superfamily Cadherin-like 9.85e-29
Family Cadherin 0.0014
Further Details:      
 
Domain Number 7 Region: 1128-1257
Classification Level Classification E-value
Superfamily Cadherin-like 2.75e-28
Family Cadherin 0.0017
Further Details:      
 
Domain Number 8 Region: 1021-1139
Classification Level Classification E-value
Superfamily Cadherin-like 1.86e-27
Family Cadherin 0.00042
Further Details:      
 
Domain Number 9 Region: 2277-2383
Classification Level Classification E-value
Superfamily Cadherin-like 1.23e-26
Family Cadherin 0.00098
Further Details:      
 
Domain Number 10 Region: 817-928
Classification Level Classification E-value
Superfamily Cadherin-like 4.43e-26
Family Cadherin 0.00053
Further Details:      
 
Domain Number 11 Region: 916-1030
Classification Level Classification E-value
Superfamily Cadherin-like 5e-26
Family Cadherin 0.0021
Further Details:      
 
Domain Number 12 Region: 138-265
Classification Level Classification E-value
Superfamily Cadherin-like 1.02e-25
Family Cadherin 0.0024
Further Details:      
 
Domain Number 13 Region: 1760-1880
Classification Level Classification E-value
Superfamily Cadherin-like 1.01e-24
Family Cadherin 0.002
Further Details:      
 
Domain Number 14 Region: 2070-2177
Classification Level Classification E-value
Superfamily Cadherin-like 1.41e-24
Family Cadherin 0.0025
Further Details:      
 
Domain Number 15 Region: 3018-3126
Classification Level Classification E-value
Superfamily Cadherin-like 6.14e-24
Family Cadherin 0.0014
Further Details:      
 
Domain Number 16 Region: 1445-1555
Classification Level Classification E-value
Superfamily Cadherin-like 9.28e-24
Family Cadherin 0.00086
Further Details:      
 
Domain Number 17 Region: 460-559
Classification Level Classification E-value
Superfamily Cadherin-like 8.14e-22
Family Cadherin 0.0013
Further Details:      
 
Domain Number 18 Region: 3429-3548
Classification Level Classification E-value
Superfamily Cadherin-like 1.43e-21
Family Cadherin 0.0017
Further Details:      
 
Domain Number 19 Region: 1662-1766
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-21
Family Cadherin 0.0022
Further Details:      
 
Domain Number 20 Region: 2913-3024
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-21
Family Cadherin 0.002
Further Details:      
 
Domain Number 21 Region: 711-823
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-21
Family Cadherin 0.0024
Further Details:      
 
Domain Number 22 Region: 2177-2284
Classification Level Classification E-value
Superfamily Cadherin-like 3.57e-21
Family Cadherin 0.0017
Further Details:      
 
Domain Number 23 Region: 1868-1994
Classification Level Classification E-value
Superfamily Cadherin-like 4.32e-21
Family Cadherin 0.0031
Further Details:      
 
Domain Number 24 Region: 2585-2695
Classification Level Classification E-value
Superfamily Cadherin-like 7.85e-21
Family Cadherin 0.0018
Further Details:      
 
Domain Number 25 Region: 2481-2598
Classification Level Classification E-value
Superfamily Cadherin-like 1.17e-20
Family Cadherin 0.0032
Further Details:      
 
Domain Number 26 Region: 2385-2493
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-19
Family Cadherin 0.0017
Further Details:      
 
Domain Number 27 Region: 1358-1457
Classification Level Classification E-value
Superfamily Cadherin-like 6.41e-18
Family Cadherin 0.0066
Further Details:      
 
Domain Number 28 Region: 563-665
Classification Level Classification E-value
Superfamily Cadherin-like 3.66e-17
Family Cadherin 0.0019
Further Details:      
 
Domain Number 29 Region: 1979-2082
Classification Level Classification E-value
Superfamily Cadherin-like 6.28e-17
Family Cadherin 0.0035
Further Details:      
 
Domain Number 30 Region: 1234-1347
Classification Level Classification E-value
Superfamily Cadherin-like 6.57e-17
Family Cadherin 0.0036
Further Details:      
 
Domain Number 31 Region: 2702-2810
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000571
Family Cadherin 0.0038
Further Details:      
 
Domain Number 32 Region: 368-454
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000004
Family Cadherin 0.0035
Further Details:      
 
Domain Number 33 Region: 34-150
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000443
Family Cadherin 0.0058
Further Details:      
 
Domain Number 34 Region: 3542-3632
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000011
Family Cadherin 0.0099
Further Details:      
 
Domain Number 35 Region: 4041-4168
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000013
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 36 Region: 4016-4053
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000754
Family EGF-type module 0.01
Further Details:      
 
Domain Number 37 Region: 274-356
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000757
Family Cadherin 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301623207|gb|XP_002940911|
Sequence length 4590
Comment PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana) tropicalis]
Sequence 
MGRYLIMLLLLLILQHLGNCEGSHGLHTSSSSMQFTQYSYNATVYENSAAKTYVGHPTKM
GIYLKDPSWDIKYKIISGDNENIFKAEEHNLGDFCFLRIRTKGGNTAILNREVKDNYLLT
VKAVEKNSNAEARTRIRVQVLDTNDLRPLFSPTSYSVSLPENTAIRSSIAKVTATDADIG
TNGEFYYSFKERTDMFAIHPTSGTIVLTGRLDYTETKHYEMEILAVDRGLKLYGSSGISS
MARLNIYVEQANEHAPVISAVRLTHPELDKDLTYAIVTVDDNDQGPNGEIASLSIIAGDP
LQLFKTTRTSPGSKEYKIVAVKETEWEMQPFGYNLTLQAKDKGSPPQFSATKVIHLTSSR
FKYGAVKFEKDIYRTEISEFAPPNTPVVLVKAVPSNSHIKYAFRNSADKNRFSINPNTGL
ISTLSPVKAKILSHIELDIITSDKKAFTKVLIKVLGTNINTPEFTQTSYKAVVDENSPIG
SSVFSVHAVDHDEGENGFITYSIANINPQPFAIDAFSGVITTLEDLDYELMPRIYTLKIR
ASDWGLPYRRETEIPVTITLNNLNDNIPLFEKVNCEGTVPKDLGVGEQITTVSAIDADEL
QLVKYRIESGDELDLFTLNPNSGVLSLKQPLSEGPANKVSFYSLRITATDGENLAQPIYI
NITVTSSRKGVHLNCEETGVAKMLAERLLQANKLFNRGTQEEVYFDSHMTNTHAPHFKSI
LPSIIAIKENVPVGANIIHMEANDLDAGFSGKLLYAISGGNDDSCFAVDMETGWLKILSP
LDRELKDQYNLNITVYDLGIPQKSSWRLLDVNVLDVNDNPPEFLQESYSVHLKENEEGHN
AIIQVQAVDKDLGVNGEVKYSILTDTDIFTINSETGVIKAVAPLDREKQHTHLLKIEARD
QAENEPQLFSHVLLKVTVEDVNDNPPVFIPSNYHVKVREDLPVGTVITWLDAYDPDVGLS
GQVRFSLLENGDGKFEVDKVSGAVRIIQELDFEEKQVYNLTARAKDRGKPVSLSSACYIN
VELIDVNENLHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDEDTGRDGEIRYSIRDGSGV
GVFTIHEEKGTIRTADNLDRETTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQT
VEPVYYPEVMENSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGFFAINPKTGLITTT
SRKLDREQQSEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPEREK
PERERNAKRDPIYRVVAVDKDDGANAEISYSIEEGDEHGKFFIEPKTGVVSSKKSSAAGE
YDILSIKAVDNGRPQKSSTTRLHIEWIAKPAPSAEPITFEEPSFSFSVMESDPVAHMIGV
ITTEPLGSPLWFDITGGNYDSRFDVDKGTGTIIVARPLDAEQKSNYNLTVEATDGTRSVS
TQVSIKVIDTNDHRPEFSTSKYEVLIPEDVQPDTEILQVIAIDRDEKNKLIYTLQSSTDP
VSLKKFRMDPATGSLYTTEKLDHETMQQHILTVMVRDQDVPVLRNFARIVINVTDTNDHA
PWFTSSFYEGRVYESAAVGSAVLQVSALDKDKGKNAEVGYSIESGNTANAFTIDPVLGII
KTAKELDRNNHGRYELVVKATDHGIPPLSQITSIHIFVTISNNAAPKFTKKEYSSEISET
AHVGSFVAMLSAYSQSSVVYEIRDGNTLNSFDINPNSGVVTTQKQLDFETLPSFTLTVQA
TNMAGLSTNSTLTVHVRDENDNFPVFAQTNYRGLISESAPPNSVVLTDDNIPLVIRATDS
DQESNALLVYQIVEPSVHKYFAIDSSTGALRTLLSLDYEQTNIFHFTVQVHDMGYPRLFA
ENAANVTIYVVDINDCAPVFSKDVYETSLLLPTYKGVRVITVNATDDDSGAYSQLIYSII
EGNIGDKFLIDPLKGTITVQNTTNLRSRYELTIRASDGRFSSLTSVKINVKESKESSLKF
TQRSYSATVLENATKVKTLTIISPLGSRINEPLFFHILNPDPRFKISPTSGVLSTTGIPF
DREEEDLFELVVEVSDEQKPPTVAHVLVQVTVEDVNDNNPVFVNLPYYAMVQIDAPEGHL
IRHVTAVDRDIGKNGEITYYLKEHSQQFQIGPSGEIKLKKQFDPDSSNKEYFITVVAKDS
GNPSYSSEVVVPITVMNKAMPVFENPFYSAEIAENANLHSPVVHVQANSPEGYRIIYSIT
DGDPFNQFNINFNTGVINVFAPLDFESHPAYKLRVRATDSLTGAHAEVFVDIILEDVNDN
PPVFREKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASS
GLIETAKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQVYEVKI
SELSKPGHFVTCVKATDADSSDTEKLEYSILSGNDDMNFIINSKTGVITVSYLRKMILNP
FYSINVSVSDGVFRSSAQVHVTVKSANLHSPKFGQNEYEVELSENSPVQTLVTELKAVDE
DKGLYGQLTYHIINDFAKDNFNINERGQLFTAERFDREIPTNKVIPVSVMAKDTGGKVGF
CIVNVILTDSNDNVPQFRATEYKVSIASDVPRGTPIVKVIASDSDEGANADIFYSIEAQS
ASVEENFGISQSSGTIITKESLIGLEDEVYSFFVKATDGGTPQKESLVPVFIRILPPEVV
LPKFSEPFYTLSISEDTAVGTELDVVKAESNEPIIYSLMKGNTLESNLDDVFVIDKQNGR
LKLEKQLDHESTKWYQFYVLAHNLHGEHEIISSVDVSILVKDVNDNAPVFDSNPYKAFIV
ENLPEGTKVVQVRAFDLDVGSNGQVSYMLGHSQDLEEIKELFSVDRETGWVTTLGELDHE
KTNKYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRFTAEIYKGTVSEDDPPDGVIAI
LSTTDNDTEEINKEVTFHITGGDPLGQFAIENMQHEWKVYVRKPLDREVKDNYLLNITAT
DGTFATKAVVEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADIRSNAEII
YTLHGVGAEKFHLNPFTGELKTSLPLDREILEVYHLMVKATDGGGRFCQAAVELTLEDVN
DNAPEFSADPYTVTVYENTEPQTPLLRVQAIDADLGLNHKVQYSLVSSAEGQFSIDELSG
IISLEKPLDRELQAVYTLTVKATDQGLPRKLSSVASVVVSVLDINDNPPVFEHREYGSSL
TEDAPVGTEVLQVYATSRDIEVNAEITYKIISGNEHGKFTINPVTGMIFIIASLDYETSP
EYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGEDSVSGQSVLMVVA
DDADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELISGYTLTIQAEDNGQPP
RRNTTTVNIDVSDVNDNPPMFSKGNYSIVIQENKPVGFSILHLAVTDKDSSHNGPPFTFV
FLSGNEDNTFQMDEQGLITTAGTLSRKIKDLFVLHIQVSDNGKPQLSSFTNIEVRVIEES
IHPPAILPLEIYITTFGEEYSGGVIGKVHATDQDVYDTLTYSLDPKMENLFSVSKTGGKL
IARKQLDVGQYLLNVSVSDGKFTTAADITVHIRQITQELLNHSITFRFANLSPEEFIGDY
WRNFQRSLRNHLGGRKIDIQIISLQPSEPPRNLDVLLAAEKVGNTYFAPKVLIQKINASI
AEIEDISGVKILDVFHKLCLDVECPLRFCDEKISVDESVMSTHSTARLSFVTPRHHRRAI
CLCKGGKCPTLDSLCDGNTCPEGTECVVDVKEGKFNCVCPSDRPGQCNVGSSVTFTGNSY
IKYRLMENENKEEMKLSLKLRTYSAHAVVMYARGTDYSILEIQGGKLQYKFDCGSGPGIV
SVQSIHVNDGQWHTVSLEVDGNYARLVLDRVHTASGTAPGTLRTLNLDNHVFFGGHMRQQ
GSKHGRNLQVTNGFRGCMDAVLLNGQELPLNSKSKNNVHIEESVDISSGCSLSAADVCSG
SPCQNGGTCSPLSNGGYYCKCSSLFMGTHCDISINPCASNPCLYGGTCIVVKEDFMCHCR
GDYTGPRCQFGPYCKDNPCKNSGKCIDSLDGPVCECESGFHGDKCLNDIDECLENPCPTG
AMCENTYGSYSCNCSNGYGGKLCTDVLPNKYVSTSWNIGLAEVIGIIVFIAGTFSIVVIF
VVCRTVANKKKKKRQSEPEDKHSGATSAFLPRQFLDPKVNKNIYSDIPPQVPVRPISYTP
SIPSDSRNNLDRNSFEGSTIPEHPEFSTFNPDSVHGHRKAVAVCSVAPNLPPPPPSNSPS
DSDSIQKPSWDYDYDAKVDLDPCLSKKSLDEKACHLYNPRESMSEIQSLSSFQSESCDDN
GYHWDTSDWMPSVQLPDIQEYPHYEVVEEPAPHYTDPNVIDTDYYPGGYDIENDFPPPPD
DFPLPDELPPLPPEYTEQYDSMQPSREMPVVGSLGSSTKSSPRYNLNKYLPRHQYPTSMS
EPQSTTSGDGNSYREPYAASYMLGFNRDFEVPIVDNMSMSGYTSAASCTDVSAGCEMESE
VMMSDYESGDDGHFEDVTIPPLDSQHHTEV
Download sequence
Identical sequences F7DJ38
gi|301623207|gb|XP_002940911| ENSXETP00000037350 ENSXETP00000037350 8364.ENSXETP00000037350

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.