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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301624025|gb|XP_002941313|

Domain assignment for gi|301624025|gb|XP_002941313| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301624025|gb|XP_002941313|
Domain Number 1 Region: 2347-2563
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 6.41e-79
Family Fibrinogen C-terminal domain-like 0.00000172
Further Details:      
 
Domain Number 2 Region: 2175-2344
Classification Level Classification E-value
Superfamily Fibronectin type III 2.36e-22
Family Fibronectin type III 0.00073
Further Details:      
 
Domain Number 3 Region: 1999-2163
Classification Level Classification E-value
Superfamily Fibronectin type III 1.9e-17
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 4 Region: 1703-1789
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000011
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 5 Region: 1515-1701
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000217
Family Fibronectin type III 0.0019
Further Details:      
 
Domain Number 6 Region: 567-725
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000254
Family Fibronectin type III 0.0027
Further Details:      
 
Domain Number 7 Region: 1794-1880
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000082
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 8 Region: 1898-1983
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000119
Family Fibronectin type III 0.0017
Further Details:      
 
Weak hits

Sequence:  gi|301624025|gb|XP_002941313|
Domain Number - Region: 307-332
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000126
Family EGF-type module 0.062
Further Details:      
 
Domain Number - Region: 399-424
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000381
Family EGF-type module 0.078
Further Details:      
 
Domain Number - Region: 151-176
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000419
Family EGF-type module 0.058
Further Details:      
 
Domain Number - Region: 245-269
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00061
Family EGF-type module 0.056
Further Details:      
 
Domain Number - Region: 1392-1475
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000719
Family Fibronectin type III 0.0053
Further Details:      
 
Domain Number - Region: 182-207
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000838
Family EGF-type module 0.048
Further Details:      
 
Domain Number - Region: 87-113
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00107
Family EGF-type module 0.082
Further Details:      
 
Domain Number - Region: 431-454
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00149
Family EGF-type module 0.035
Further Details:      
 
Domain Number - Region: 214-238
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00164
Family EGF-type module 0.042
Further Details:      
 
Domain Number - Region: 338-362
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00244
Family EGF-type module 0.049
Further Details:      
 
Domain Number - Region: 276-300
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00286
Family EGF-type module 0.05
Further Details:      
 
Domain Number - Region: 121-144
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00381
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 492-516
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00419
Family Integrin beta EGF-like domains 0.072
Further Details:      
 
Domain Number - Region: 368-392
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00495
Family EGF-type module 0.048
Further Details:      
 
Domain Number - Region: 461-485
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0103
Family Integrin beta EGF-like domains 0.062
Further Details:      
 
Domain Number - Region: 524-547
Classification Level Classification E-value
Superfamily EGF/Laminin 0.016
Family EGF-type module 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301624025|gb|XP_002941313|
Sequence length 2571
Comment PREDICTED: tenascin-X-like [Xenopus (Silurana) tropicalis]
Sequence 
mpsflpllffilffkgclappststqcpdaggvrallkrleileklvrdikgqcsppccg
nvqsgaddpashkspscpqpaescsggcggeehgicidgqcqckdgymgencqlktcped
cndqgrckdgqcfcfsgyfgvdcsskscpnncqnhgrcdkgvcicdpgftgvdcssrtcp
kncfnrgrcedgvcicypdytgpdcsiktclndcqdhgrcedgmcvcdpgftgidcssrt
chndcqnhgrcenglcvcdsgysgpdcgimscpedcneqgrcvsgvcvcdsgfigpdcgt
rvcspecerrgrcedgecicnpgftgpdceiktcpndchkqgmcvdgkcvcdsgytgvdc
qvktcpnkchnrgrcedgicicnsgysgsdcgskscpkncsgngqcvkgkcvcdsgfigp
vcgtracpagcgnhgrclrgtcvcspgytgvdcasrlcpknchnrgrceqgvcicnpeyi
gldcgsrtcpknchgkgqcddgvcicdlgytgldcatkscfndchhrgrcedgvcicdvg
ytgldcgtlscpkdchnrvvtelvavtglhvtsveessvtiewdlqqtppdvyaisfkak
kengllnntvdgtltsfvqtglasgeeylvsiqpqkgltvgpettvtattsieaplglrv
teitttsfllrwerpqsfpdryivtlvsptgkerklkvpgkgdrvritaleegtiykvil
raergqeqskgmettaktaldrerkniddedarkkkgkvvtpqqggqlekprfsedhyrp
attgqvlihsgggegssktreiteyivedqtqkgvvnttrktiqttiittyhiqnhkegd
vvdmfedtksseysqtkhlpdrkkissdvegsdvgettgqtditgtiirkhtpekkvqsw
iargkiidassvekppnhltqktnktsvqlgdtqaagqqrkkpsdksvevvtgiqvnlgs
tesktfsdeklpltinekqlenlkderdpgsilddvstkvhtegrnsrknntglekkrld
agvrvqkqnkmeklypgglhikavienlptklsvyngtfiqrlesylrstsyplranqtv
esvaraiflylvkykpnsftgmvydrlpqktpdspeneepfgaskiqgnmgsvmvdnkpd
qakevvvlrpkdrhatmegsqrkvdtpaisrytssselyevnmkvlketptsreeeklis
ekstlqrlplktqlnktysekisdstkrtivpdnqrvwqagekdktftgknkneslkktt
vspttmeyliytpsvdtlnrptqssedktapgvilltndkgitpkkqpyygkkvpprpek
vgskikegeiknerlidkdsrskilddkasllqaregeekeneektiqalgsagpsthpt
svkisgpgifgrptvvkstptnlvvsldglgvlldkvmihyrpfqaimtdmpqqlevgkg
vgkvvirdlepgttyrleihgllrgqssksyilvadtaqsptilptevttkptispiedi
ltttassattrpripvqmgalqvrnvtsesitlvwkakigaydsflvrydevtdgvspqe
lsvpgdqrevtlrgltqdtryevllygiregkltrpfkeevttephpkrgtpprlspllv
sevhrnsallswepldgdfdayilrygspegpmqeetlrgdqtsflisglvaavnysvel
rgiwgesytepqatyvltekpqpprlesltlfdvrseslnlswdvqggdfdsfllwyrdg
egkpqeialdkdlrsstvrdlkpgkkykfvlygisgekrskpvtaegstdklqppqlesl
svsdvhsdsvllswvvqggkfdsfllnyrdaegkpkeaslegeqrsvpvgdlkpgkkykf
vlygisggkkskaaiaetttkprekvvpsspatptiprlvdlqaneigkdsvnlswrveg
essfdwivvqyggpdgvvreqqvpggdtstlvtgllpsrrykfslygikgqkhskplste
ietgfleavgqpssflnylfvsprgphsilvswqapegsfdsfvirygieghekpqkeas
vngtartlllanlqpdtpykvklhgvrrgkeqgslettgrtgsldleppqnlrfndveet
sltvswdppnpetttfkvsyqlakggepesvnvvgdskslqrlnvgtryevtvvsvrgfe
esqpltgyittggggphslhahdvteesallrwepepgfvdryvvtyraenvlsvthevp
gdqtelpisglnphteyyasvqslhgsklssptstsfitsadtprellasqitaqsallt
wkppqvvpdgyrlvyqthdgeikelillanlssftlshltpstpykvqlhalrgasssap
istsfttgrirypfprdcwekhmngdlqsgvftiylggskddpllvycdmetdgggwivf
qrridgrtdfwrnwrqykegfgnltsefwlgnialhrlsslapyelrvdlragaeaayav
yedfrvegedkhfrlrigayrgnagdslsyhnnmifstrdrdaekrilpcsisyrgawwy
knchyanlngmygnnkdhqgvnwhtwkgfefsipftemkmrpqrtgnwrrl
Download sequence
Identical sequences gi|301624025|gb|XP_002941313|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.