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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301625673|gb|XP_002942031|

Domain assignment for gi|301625673|gb|XP_002942031| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301625673|gb|XP_002942031|
Domain Number 1 Region: 1655-1711
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.88e-24
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 2 Region: 1105-1161
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.28e-24
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 3 Region: 1327-1383
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.57e-24
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 4 Region: 676-733
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.36e-23
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 5 Region: 1270-1327
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.32e-22
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 6 Region: 899-955
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.26e-22
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 7 Region: 843-899
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.22e-21
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 8 Region: 1711-1767
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.12e-21
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 9 Region: 621-677
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.71e-20
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 10 Region: 1048-1105
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.83e-20
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 11 Region: 462-521
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.57e-19
Family KRAB domain (Kruppel-associated box) 0.002
Further Details:      
 
Domain Number 12 Region: 1368-1420
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.88e-18
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 13 Region: 1617-1668
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.56e-18
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 14 Region: 1499-1551
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.39e-17
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 15 Region: 1148-1207
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.34e-16
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 16 Region: 722-774
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.67e-16
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 17 Region: 1011-1062
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.78e-16
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 18 Region: 1234-1284
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000289
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 19 Region: 805-856
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000932
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 20 Region: 1469-1510
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000324
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 
Domain Number 21 Region: 582-634
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000115
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 22 Region: 954-1021
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000285
Family Classic zinc finger, C2H2 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301625673|gb|XP_002942031|
Sequence length 1829
Comment PREDICTED: zinc finger protein Xfin-like [Xenopus (Silurana) tropicalis]
Sequence 
mgdyagadgermepalpeegaglyvrrrvdrleaslllrgqdpvtnadvgtglaghlhfl
lckldqnlcwnwmgpescrlepvgwteereleqtlrleagerekdsletrslaqqnvelr
rrleeeqaaykrklqayqegqqrqaqlvqklqakvmqykkkcgeaeqqllersteleqer
ltltadwtkareeleqresewrreeesfnsyfsnehsrllslwrqvvslrrlfsemksmt
erdlsqlhkelsqscrslhasclnvsgsqrmaestgvvqaerqalqlaqleeqlkdkvrq
miqlqaaydaekaelnakvtelnktaerlqdesreserqrlqeqeqsrseeqaallgeev
dalkcekevlqealreltqavlsdsdsglqlsgsdrtsdpteseglgfslrgglssslrt
ssplrrssphrsssprrslspafresavsavhsalqrrqlqlqvaptfddvavyfswsew
eslspsqrdmyksvmaenyecvlslgypigkpeivskieagedlwsrsdarperkekdge
tpkdsdwaaedykevlylgtlaavksepveepvvegsnsakkshicshcgklfscyaaaa
rhqrmhrlqkahqcphckkgfvqksdlikhhrthtgerpyqcaecqknftersalvnhqr
thtgerpyrcpdclksfnqrsaltkhrrthtgerpyhcsvcaksfiqnsdlvkhvrthtg
ekpyecplcgkrfaessalmkhkrthnaqrpfrcsecsrsfaqnsdlaahmrkhtesqnv
pdpdsvvgtgplssqnevitaaespfscakcrktfkqwtsllnhqqahcgekpylcsycn
kgfvqnsdlvkhlrthtgerpyqcadchkgfiqksdlvkhlrthtgekpfkcthcdkkft
eksalakhqrthtgekpykcstcekaftqrsnlilhqrihtgerpykcttclrsfiqnsd
lvkhqkvhtrsslsdprapavtspyqcsecdrtfshwstfmkhsklhsgekfqcmeckkg
fvqksdlvkhlrvhtgekpfkclvckksfsqksdlhkhwrihtgekpfpchtcdksfter
salikhhrthtgerphkcsvcekgfiqksaltkhmrshtgekpyacaqcgksfiqnsdlv
khqrihtgekpyhctecnkcftegsslvkhrrthsgekpypctqcektftqssdlvkhtm
vhngdtppaatafheilikqetgseglrsrlvsypcpecdkvfcqrpalvkhqrthkaek
rypcnecdksffqtsdlvkhlrthtgerpyhcsecnkgfiqnsdlvkhqrthtgerpytc
aecnkgfvqrsaltkhmrthtgekpykceqcqkcfiqnsdlvkhqrihtgekpyhcpdcg
krftegsslikhqrihsrikpypcnvcgksfsqscnllkhlkchseqnppvvlgsgpglv
sktqpdppdnmvygdtaentnyvspeaarerlfkcndcgkcfahrsvlikhirihtgerp
ykctqcarsfiqksdlvkhyrthtgerpykcglcersfveksalsrhqrvhnnkspvpds
aaeqhqvtywgeseddpkslvpqlhvvkeedprvmygplsllqsccppaikakltppymc
secgksfthrsvflkhwrshtgeqpytckecgkgfsqssalvkhvrihtgerpyacptcg
ksfiqnsdlakhqrihtgekpyrcttcgkkfidrssvvkhsrthtgerpypckecgkgfv
qrsdlvkhtrthtgekpyacngcersfsthsasvrhqrlcnmgrpcryqnslfysaditw
qeqyaelvqvpmnseepmnaigwisevvl
Download sequence
Identical sequences gi|301625673|gb|XP_002942031|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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