SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301626399|gb|XP_002942387| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301626399|gb|XP_002942387|
Domain Number 1 Region: 737-957
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 8.12e-75
Family Reverse transcriptase 0.0004
Further Details:      
 
Domain Number 2 Region: 1371-1427
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.15e-23
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 3 Region: 1259-1315
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.59e-21
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 4 Region: 1315-1371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.05e-21
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 5 Region: 1426-1483
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.52e-21
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 6 Region: 1483-1539
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.17e-20
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 7 Region: 1524-1574
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.27e-17
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 8 Region: 1220-1272
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.03e-16
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 9 Region: 401-425
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000262
Family Retrovirus zinc finger-like domains 0.0043
Further Details:      
 
Domain Number 10 Region: 462-503
Classification Level Classification E-value
Superfamily Acid proteases 0.0000169
Family Retroviral protease (retropepsin) 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301626399|gb|XP_002942387|
Sequence length 2034
Comment PREDICTED: hypothetical protein LOC100493142 [Xenopus (Silurana) tropicalis]
Sequence
mplitptqvyewalkekvnpdhvfaidrvppevtlemlesnlskyrhlegahliadegst
mdgyavllfkvsdplnsevgpyavfpagdlsvgcplvypqavvapwkveapspdagytsr
krrllpslpcnvqhtvkqeplvtetseakdvsisehpltdtitqmtealaqglqlshykk
lktfsgtepvptgeegfetwkesalqaldewacseqtkrqrimehvrppaasivlnfkas
hkdynamdiidiltsaygkhedpdqlladfkqmrqkssedvsaftlrlenmlrnllskkv
itaeevdtlrlkqllkgmspffpmystlqillrdkrdtgfidlmkvikqeeatlrfagts
rvpkqnpalptskdikltgkgvpsitpirkrfpsewhkgvpattptscfgcgqeghfvkd
cpekfspnavqtmscgkpssypnkvtkpsatkdrnmvgpkslvdilldgqpvqalfdtgs
qvtiihysyylqhlshkplqparglelwglnqqaypihgllqvtitmprchgtlplsqev
davvcpdtgnpnaapiilgtnvsevrttlnpsvtvtkaprysdhgpevvcntftvtykyg
llrhvagqtveippgsirtvraltdvkpemmkgyrcvlvespseavvqngwkvvpekkew
gkkiplvaqvtvqnispyavvirpkqelaycypvhevsdlaevqstpvsasvsnlafdfg
dspvseewkqrlsngllerrqvfstdemdvgcakstqhtirlsdstpfrerprrvppkdr
edlqrtlqemkrrgiiadsrspyaspivivrkkdgsirlcvdyrtlnrrtvpdqytlpri
eetlealngskwftvmdlrsgyyqvpmasedqektaficplgfyqftrmpqgicgapatf
qrlmekmlgdlspreclvylddiivfgttleeheqrlmnvidrliaeglklsidkygvsh
rdhfqyvsrlreglttayrlaeenvsklnannkrrydhkvkyrellpgdkvllrnlgvpg
khkladrwrnelfdvvsklpgipvykikgpegrvkawhrnhllpvsqasdvstgidieeg
qmegtsdfpnateipptvqqtpmdaqmpepdeggndvtqsdslpsedwpipvrdnlnpas
pefvprsetnqrlllsdgnpsnedsarglpprevrwgarvrqpppvltydtlgnpsyvph
aglyhawvgavsnlnthrgktitctecgkgfahknnllshmkirtgekpftctecgkgfa
qknnlvshmkihteekpftctecgkgfahknklvshmkihtgekpftctecgkgfahknk
lvshmkihtgekpftctecgkgfahknklvshmyihtgekpftctecgkgfaqknnlvsh
mkihtgekpftctecgkgfaqknnlvshmkihtgekpftctecgksfaqknvlvshmkih
tgekpftctecgkgfahknhlvshikihkgekpftctecgkgfarknhlvshikihtgek
pftctecgkgfahknhlvshikihkgekpftctecgkgfarknhlvshikihtgekpftc
tecgkgfahknhllskspaclataakekrgnkftsspsgtaiptthqpspvgvgahkivt
sagvgavsdpsslggkekkrkfksnhlvpeewalvvndgappskgkksseisgphvitls
npsfrlsqpvsdhtlstpdsvrnnevnglesleqgnmgfstesgvqhlppthlevrhmec
kgtpnetpagwvvnipevlsfgdckltqfsvpqdipllevenigitpilesadrtvwgdd
gagvvdtkedsmvdseknnpvksavhvevsppltstdpnviairsnqeeveraeadyras
kappvveelipsaapdtsegvageiekapeplqvlqmmgasdpipatsradilktqveer
hyqslsqeeprdedniveegetgvanpsaplipaeelktflesnlgvkldnklhlalenw
hdlpliirsvrhyigvikeaknygtaeylrtikfhkkclshlasvrakalpntq
Download sequence
Identical sequences gi|301626399|gb|XP_002942387|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]