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Domain assignment for gi|301626448|gb|XP_002942401| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301626448|gb|XP_002942401|
Domain Number 1 Region: 128-360
Classification Level Classification E-value
Superfamily vWA-like 1.78e-72
Family Integrin A (or I) domain 0.0000000141
Further Details:      
 
Domain Number 2 Region: 378-469
Classification Level Classification E-value
Superfamily Integrin domains 4.03e-30
Family Integrin domains 0.0000131
Further Details:      
 
Domain Number 3 Region: 636-720
Classification Level Classification E-value
Superfamily Integrin beta tail domain 2.75e-23
Family Integrin beta tail domain 0.0000125
Further Details:      
 
Domain Number 4 Region: 23-77
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000000157
Family Plexin repeat 0.00018
Further Details:      
 
Domain Number 5 Region: 594-635
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000017
Family Integrin beta EGF-like domains 0.00083
Further Details:      
 
Domain Number 6 Region: 552-590
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000022
Family Integrin beta EGF-like domains 0.0025
Further Details:      
 
Weak hits

Sequence:  gi|301626448|gb|XP_002942401|
Domain Number - Region: 477-504
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0335
Family Integrin beta EGF-like domains 0.023
Further Details:      
 
Domain Number - Region: 521-552
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0391
Family Integrin beta EGF-like domains 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301626448|gb|XP_002942401|
Sequence length 794
Comment PREDICTED: LOW QUALITY PROTEIN: integrin beta-3-like [Xenopus (Silurana) tropicalis]
Sequence
mkpdlyicilqlllltagtwgasicatrgvtscqkclavnpqcawcsqenfgkgaprcdl
ksallsngcemeniefpvstfqvaenrplsvkgsegdtreitqispqkidlylrpddpkv
fnlqvrqvedypvdiyylmdlsysmkddlikiqtlgtslsermrrltsnlrigfgafvdk
pmapymfmsppeviknpcyefhtecmptfgykhilaltdevtrfneevqkqkvsrnrdsp
eggfdaviqaavcdnkigwrnesshllvfttdarthialdgrlagivqpndgkchldlnn
nyaasttldypsiglmteklsekninlvfavtnevlslytvrkqlnenfdlysssqpsgn
cpslfnshdpplptnlxvxkirskvelevrdlpeelslsfsascqndeftpglksctglk
igdtvsfsieakvrecpsvrektftikpvgfkdsltvtvhfqcdcacqdydqpnstlcnh
gngtlscgicqcnpgwlgpycecseedynpsqqdrcspkegaticnrrgecvcgqcvcha
ndlgkvwgkycecddfsclrykgemcsghgqcncgdcicesdwtghycncttrtdtcmss
sgllcsgrgqcvcgkcectqpgsygdtcekcptcpdactfkkgcveckkfergpwfedss
ckhicrdeiesvnelvdngknavnctykdendcvvrfqyyedssgksvlyvineaecpqg
pdilvvlmsvmgailliglvalliwkllisihdrrefvkfeeerakakwdtahnplykga
tstftnityrgnte
Download sequence
Identical sequences gi|301626448|gb|XP_002942401|

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