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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301626947|gb|XP_002942647|

Domain assignment for gi|301626947|gb|XP_002942647| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301626947|gb|XP_002942647|
Domain Number 1 Region: 1593-1840
Classification Level Classification E-value
Superfamily Ankyrin repeat 3.89e-56
Family Ankyrin repeat 0.000000232
Further Details:      
 
Domain Number 2 Region: 278-413
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000267
Family Growth factor receptor domain 0.005
Further Details:      
 
Domain Number 3 Region: 756-886
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000628
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 4 Region: 520-559
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000679
Family EGF-type module 0.015
Further Details:      
 
Domain Number 5 Region: 629-672
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000745
Family EGF-type module 0.0072
Further Details:      
 
Domain Number 6 Region: 919-961
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000273
Family EGF-type module 0.012
Further Details:      
 
Domain Number 7 Region: 594-634
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000322
Family EGF-type module 0.011
Further Details:      
 
Domain Number 8 Region: 555-594
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000419
Family EGF-type module 0.006
Further Details:      
 
Domain Number 9 Region: 883-918
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000447
Family EGF-type module 0.0093
Further Details:      
 
Domain Number 10 Region: 1125-1168
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000468
Family EGF-type module 0.0095
Further Details:      
 
Domain Number 11 Region: 138-181
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000121
Family EGF-type module 0.0087
Further Details:      
 
Domain Number 12 Region: 730-767
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000123
Family EGF-type module 0.016
Further Details:      
 
Domain Number 13 Region: 691-728
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000131
Family EGF-type module 0.01
Further Details:      
 
Domain Number 14 Region: 250-292
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000166
Family EGF-type module 0.0093
Further Details:      
 
Domain Number 15 Region: 1038-1078
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000017
Family EGF-type module 0.0085
Further Details:      
 
Domain Number 16 Region: 957-998
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000411
Family EGF-type module 0.014
Further Details:      
 
Domain Number 17 Region: 175-218
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000429
Family EGF-type module 0.0048
Further Details:      
 
Domain Number 18 Region: 441-478
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000692
Family EGF-type module 0.005
Further Details:      
 
Domain Number 19 Region: 1271-1302
Classification Level Classification E-value
Superfamily Notch domain 0.000000157
Family Notch domain 0.0022
Further Details:      
 
Domain Number 20 Region: 217-258
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000322
Family EGF-type module 0.012
Further Details:      
 
Domain Number 21 Region: 1078-1121
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000326
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 22 Region: 1009-1041
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000411
Family EGF-type module 0.015
Further Details:      
 
Domain Number 23 Region: 1158-1199
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000712
Family EGF-type module 0.0096
Further Details:      
 
Domain Number 24 Region: 51-85
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000612
Family EGF-type module 0.021
Further Details:      
 
Weak hits

Sequence:  gi|301626947|gb|XP_002942647|
Domain Number - Region: 477-518
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000532
Family EGF-type module 0.023
Further Details:      
 
Domain Number - Region: 1199-1229
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00229
Family EGF-type module 0.019
Further Details:      
 
Domain Number - Region: 22-49
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0898
Family EGF-type module 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301626947|gb|XP_002942647|
Sequence length 2067
Comment PREDICTED: neurogenic locus notch homolog protein 3-like [Xenopus (Silurana) tropicalis]
Sequence 
maarsgsslsvdglmlgldcqipcrnggvclslengtqicrcpdgedctyrdpclsvqck
nggscyrfsatdyrcqcetgwtgalmektalteilvyqfnaktgalaiasqlltivvsvk
ldgqltwmvsagknceyldfctpnrcknngkcinmvpsfrcqcpigfegescekdvdecq
aadtcrnggtcenlvgsfkcecpesyhgtrcemrrgvcaadsclnkgkcqqmefykyqcv
cptgytgskceeniddcinhrcenggsckdglgkytcqctpgwkgwycsndidecqtpgi
cknggtcqnipggykcvcvngwdgdncehniddcatatcaegatcidhvgtflcmcppgr
igyqgpqceddvdectsspcknggqchnqpgsyncscpggfqgsvcetdinecavllvts
vparitlasshatvtpgtlcdedinechsspclnggacnntqggflchcppgtiqplctl
qdnnctnvtcvhgncqkqnnrttcicdegwngsvcdtyiqcvtnpcqnggvcqpfqerfi
cscvsgytgssceldvnecekrpcknggrcvntpgahhciclpdytgtlcealvdpclsd
kcqnggtcvsetfsclcpagytgehceedidecvsspcqngascqnkansyicvcdegye
gekceintmdcttrttcicdegwngsvcdtyiqcvtnpcqnggvcqpfqerficscvsgy
tgpncetllspcysnpcsnggtchhypdqnviqcdcpagwqgssceldvnecekrpckng
grcvntpgahhciclpdytgtlcealvdpclsdkcqnggtcvsetfsclcpagytgehce
edidecvsspcqngascqnkansyicvcdegyegekceintmdcttssclnggtcvdgia
sfwclcperftgkhcqeelsrclsnpctnrgicqhipggyfcscpygytgancemavdfc
stapcqnggscsqsgisykchcasgwigshcetplhgcrarvsqdvettalcnghgtcvd
sghsyichcfpgytgslcevktgfcqpnpcqngahcqeqdgsflcqclpgflgqtcterd
pclsrpcfhngvcvaqggeykcqcpsgtqgihceinpddcatvssepkcfhggtcrdeig
gfscfcppgfvgkrcegdvneclsnpchpigteicvqlnnaykckchrlytgqkcdqpin
fcannpcfnggscavtantplgftcscpkcadfyefyyeeniytniltdeigikshylqi
tdvvtnnkdplynnycldhfanghcergcdnvecgwdggdcsneerkksegslilvlsya
ppvlhqreinallrnlsmliragirlqkdssgnmlfryrrsdsldelfpdrlqrweyevi
enpnlkdlkketmsredtigcvlflevfgaecvqppclhtsknvadfvtalsektepclp
ysllgvkykdapidptqmsatqlpwplvwasvavgaalvlggfigvqlsrkrqhgvlwlp
sgfsrhrsgegirrrepvgedatglrplkhdsvydvdlatdeeilqpkykrakvpeecsi
ldhrqwsqqhidagvrfpqcialtppqqeadcrdidvrgpdgvtplmsaicaggglepvg
ggadppevessavvisdlisqgaslnaqtdstgetalhlaarfsrqdavkcmldagadtn
vqdklgrtplhtaiaadalgvfqtllrcrqtdidarmndgstplilaarlpvqnmveelv
scgadlgaadtrgksalhwaaavnnaaavktllcngankdlqdkrdetplflaaregsle
atrillehqadrdlcdhtgrqprhiardrghrdiqklleercpavprntsvatpsagaqa
kkthrprtkehvkptplphidlstscypqapplsappyiqgpppdssccqshhslmsygg
ncqpyprsgsfssavpgcqwgnrgwrvhfcpsgctvseapysgggqpvsphahwlpeshh
pqspkcqsqpsgycpnpaleqtapkdlpctptdqfgnsiyltppssqygypspaspeets
qtqtcmhhhpfltpspesrnpwgvssp
Download sequence
Identical sequences gi|301626947|gb|XP_002942647|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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