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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301626998|gb|XP_002942667|

Domain assignment for gi|301626998|gb|XP_002942667| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301626998|gb|XP_002942667|
Domain Number 1 Region: 593-775
Classification Level Classification E-value
Superfamily vWA-like 1.7e-39
Family Integrin A (or I) domain 0.00092
Further Details:      
 
Domain Number 2 Region: 1950-2151
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.61e-37
Family Pentraxin (pentaxin) 0.001
Further Details:      
 
Domain Number 3 Region: 2671-2740
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 8.48e-20
Family Complement control module/SCR domain 0.00081
Further Details:      
 
Domain Number 4 Region: 3357-3426
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 6.12e-19
Family Complement control module/SCR domain 0.00081
Further Details:      
 
Domain Number 5 Region: 3241-3310
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 4.45e-18
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 6 Region: 3940-4005
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 9.59e-18
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 7 Region: 3023-3092
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.81e-17
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 8 Region: 2314-2383
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.08e-17
Family Complement control module/SCR domain 0.00091
Further Details:      
 
Domain Number 9 Region: 3473-3537
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.78e-17
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 10 Region: 2372-2433
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.75e-17
Family Complement control module/SCR domain 0.00098
Further Details:      
 
Domain Number 11 Region: 3299-3368
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.75e-17
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 12 Region: 3881-3950
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 4.17e-17
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 13 Region: 2906-2976
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 8.2e-17
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 14 Region: 2488-2553
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 9.59e-17
Family Complement control module/SCR domain 0.00096
Further Details:      
 
Domain Number 15 Region: 3765-3828
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.06e-16
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 16 Region: 2430-2494
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.64e-16
Family Complement control module/SCR domain 0.00085
Further Details:      
 
Domain Number 17 Region: 21-265
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 8e-16
Family DNA polymerase I 0.079
Further Details:      
 
Domain Number 18 Region: 4058-4117
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000111
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 19 Region: 3415-3484
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000114
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 20 Region: 2215-2273
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000195
Family Complement control module/SCR domain 0.00064
Further Details:      
 
Domain Number 21 Region: 3081-3149
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000262
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 22 Region: 2965-3034
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000375
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 23 Region: 3823-3883
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000584
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 24 Region: 2790-2858
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000082
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 25 Region: 3999-4067
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000139
Family Complement control module/SCR domain 0.0023
Further Details:      
 
Domain Number 26 Region: 2730-2794
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000167
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 27 Region: 3588-3655
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000195
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 28 Region: 3197-3252
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000208
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 29 Region: 3647-3709
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000375
Family Complement control module/SCR domain 0.0023
Further Details:      
 
Domain Number 30 Region: 1523-1671
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000885
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 31 Region: 3533-3598
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000129
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 32 Region: 953-1020
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000153
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 33 Region: 1821-1946
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000251
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 34 Region: 892-963
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000153
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 35 Region: 2849-2917
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000032
Family Complement control module/SCR domain 0.0032
Further Details:      
 
Domain Number 36 Region: 2155-2221
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000639
Family Complement control module/SCR domain 0.0024
Further Details:      
 
Domain Number 37 Region: 2545-2613
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000115
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 38 Region: 2610-2678
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000032
Family Complement control module/SCR domain 0.0022
Further Details:      
 
Domain Number 39 Region: 1721-1839
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000706
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 40 Region: 3717-3770
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000625
Family Complement control module/SCR domain 0.003
Further Details:      
 
Domain Number 41 Region: 2268-2311
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000086
Family EGF-type module 0.029
Further Details:      
 
Domain Number 42 Region: 1009-1069
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000195
Family Complement control module/SCR domain 0.0029
Further Details:      
 
Weak hits

Sequence:  gi|301626998|gb|XP_002942667|
Domain Number - Region: 4109-4145
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000231
Family EGF-type module 0.028
Further Details:      
 
Domain Number - Region: 4177-4206
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000402
Family EGF-type module 0.018
Further Details:      
 
Domain Number - Region: 4148-4178
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000765
Family EGF-type module 0.02
Further Details:      
 
Domain Number - Region: 793-933,979-996
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00115
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number - Region: 1244-1306
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00135
Family Complement control module/SCR domain 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301626998|gb|XP_002942667|
Sequence length 4207
Comment PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Xenopus (Silurana) tropicalis]
Sequence 
myeaaiallakpgkdpqlresyrpislltadvkilakilakrlaqvvkylvgddqtgfip
gkttalnlrrlflnmsikhtnsntravaaldiakafdtvewpflwevlqtngigpnfiay
ikllynkptaalrvnsdltepfdlsrgtrqgcplspllfalaiepfsqavrqhphlvgle
ianrvekiqlyaddtlvylgdrgpslntlislttqfatvsglcvspsksvlflldpptlg
enlencplqvvqeftylgiritnpltkyydlnvrplmtwvqnkteawaalplgpmgriql
ikmiitpkiqyalwhspvwvtkeffnsldkilkqfiwgksrsrlnvetlqlpqgagglaf
pnmfmyflsaqlthcrqmlvgmaeknlyqlwsaitslqtspfrgllakgprakdskyssl
lalqqkvwqtahqvlndkslhpqtpifnnlefpslraaqpypawleqdvctlgkvwgrrg
miqfrtlqrdyglsnsqwlayngiatalrkrnsahtitigasvvantiaeenckglmskl
wttyshqlpsyrssssqivqftdsrkqqssettenkveklgqyfkknirrlrekslsldl
vflvdesssvghsnfvnelrfvkkllsdfpvvpsatrvaiitfssktnvqtrvdyissse
phqhkcsllnreipaitykgggtftkgafqqaaqilrysrsnstkviflitdgysnggdp
rpiaanlrdlgveiftvgiwqgnirelhdmashpkeehcyllhsfaefealarralhedl
psgsyiqedishcsylceagkdccdvmasckcgthtgqyecicekgyygkglqhectacp
pgtykpegtpggastcitcpdpnhtsppgstsvddcvckqgyevegsvckvvhcpelrpp
engyfvqnicnnhfdaacgircktgydlvgsnirlcqpnglwtgsdatcrvrtcpklhtl
ehgrmncsssdtsygtmciaycndgyvlegsskllclgssqwdskvpqckemhcpvfhkp
ngvlsspsncgqepakygyschvgcnkgfmlsgvkdkikcvangkwsddiqkamckdtep
pkiicpedihvenaehqnsalinwkvpeavdnsgeevsiqvspaflppyvfpigevsvty
tatdvsgneasctfnirvidvdppvidrcrspptiqvtgnekfqsasweepqfsdnsglp
liitqthspgdlfpvgrtvvqytaidpsgnkktcdiyitikgspceipftpqngelaclk
dvegvnctlvckegyalaegstqnlycafrdglwkppkradwpdcslnrfanhgfksfem
lykatrcddnsllknfadafqsslgkmvpsfctdaddiecrledqyqrqcleynydyeng
faigpagwgaankldysydedffdatetedaekplsdsphtaplrvkrhrrlnagaadqk
vkfifnitasvplpkqrndtleqenqqrllltletltnrlkrilrkeplhsfhfssemii
adsnsledgkaflfcrpgsvlkgrmcvncpkgtyyslehracescwtgsyqdeegqmdck
scpagtyteylhskriseckaqckpgtyssngletcescphgtyqpvfgskacevcpngm
stvkrgsvdksecgvpchagefsrtglvpcypcprdyyqpepgksyclscpfygtttisg
arsiadcssfgssfsaaeesvmipispenvnskykvssqvfnecllnpcqnsgtctqigs
gyicscikgytgakceneinecssipcrnngicidrvgefdcqclsgfsgtlceeninec
ssnpclneaicidginafycrcangflgprceieideclsrpclnngvcddlkagfqclc
pagytgkvcekdideclsgpckngasctdginsfrcqcpegftgqvceinvddcvsnpcl
nnatcvdglnsyickcqpgysgirceteqpfgfnldfevsgiygyvlldnvmptlsaitc
afwmrssdttnygtpisyaldngsdnaflltdyngwvlyingkekitdcpsvndakwhhi
avtwtntdgswkvyidgkqsdggkglsvgesipgggalvlaqeqdqrgegfnpaesfvgs
lsqlniwdhpltpaqikslaiscpvelqkgnvlawadflpgvvgrvkvdhkskfcadcpa
legtsphlhatksdhkpgskislfcnpgfqivgkperqclnlgewdqplphceriscgkp
prlengfynaedlfagstvtyqcnigyyllgdsrmfctdngswngispscldvdeceigs
dcdehascmntngsyictcippyhgdgkkclepvkckdpgeiengnysgnhfgvgsqlmf
schegydliglvkvtclesgewddalpycqavscgkvpapnngeilgsnftfgeivtfrc
negytligneetvclanrswshalptcesvtcskpkeiengifslsgltfnstasyackt
gyslqgpatliceasgnwssevpscdlvscgppplvrdadatgdnytysniitykckegy
tlvgpdtincsssgkwsehipqcmavscdeppnvdyasshsshrlfgdtayyycsdgysm
vdnaqmlcntegnwvppdgkeipnciadfcerpssvahsilesvnkakfvsgstvsfkcm
egfvlnttariecvrggqwipssltiqcipvrcgeppsikngyvsgtnysfgsvvayscd
kgyyikgekkrtclasgewsgrlpachpgscddppklengfvksktgllyeskviyacnp
gyklvgsnvrvcqlnrhwysespptcvlltcekpppvkygsmkgenfevgskveffcedg
yelsgdlswtcqkngewdkkqtptcmpskcqdpplyenhlvlkevpnevgivrfsckegh
vlegssvlkclpsqqwndsfplcklvfcssppelaygepisvpslyfgstvkytcvdgfl
lkgesvitcnasgmwspdfpncspiecpqpeeilngivdvqgltflsaalytckpgyeli
gnstlicgadgywqggkpickpikcskakeilngkfsfqslnygqtitytcnrgfrlegq
nvltcletgewnsnppickeitcdppqgidngfvegadysygamiifscmpgfqlvglam
qtceesgwssstpvclhtdcglpphidfgqytivtfeekiltddelkhsifgvsniilsp
tttsntlktenhsensqlseylygtnviyscnngyeilgmsvltckedgtwngsapacap
iecsiptdpengvmhytdntigssvhfeckpgyelngsdksiclankqwnneipkcviis
cktpnkilhgytevsnytymsvihykcdkgyqiyglsqrtcqiskqwdgeepicvpvscg
qppmvingkvigneytfsktieyvcnegyrlygeeirtclengnwsgttpsclaitckis
ttvnngevtgtecgvgkeilyrcnhgykmqgtpkltclndgtwnsnaplcepihcepped
isngylnssnfkyneyihyvcfpgyemhgsstrqclangawsgspptclpcecptpvvqn
gimsgddftcghsvsikcregfkllgsseltcqsagkwssgfphcgkvpcgpppsipnaf
ingssstdedairyncvagyimqgksellctkegvwskpypncqllscglppsvlnavli
adsytygstanyrcqdgyvmhqdvssktcledgswspgdivcvpkkcllqstliqiknde
teydinktitivckegytltgpststcmndgnwipevnnnictpvscgepaapehgivlg
trylfkdsvlyqcnagfeihgptervcqinglwsdvepqckkischppeplengvihgag
ylfedelhyscnhgfelngpsrrichidkqwipppptcvsvtcdslpyienavytstgnt
ythnitftcnfgyhlvgpphvrclvngtwskplpqcketrcevpqqpenghaeyenvtvg
stvryqcqngytlegedlaecttngtwshpvpickanpcpvpfvipenailtetdfyvgq
kvsikcrkgyqlqgqavitcnadetwtdanvkcekiscgpphtiqngilrgmyhqfgdvv
tyscysgymllgsfrsvclengtwtappsckavcrfpcqnggvcerpnacscpkgwmgrl
ceepicplpclnggrctapfrcecpngwtgsrchiavcqspclnggicvrpnrcqcppsw
sgpdcsr
Download sequence
Identical sequences gi|301626998|gb|XP_002942667|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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