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  Home > Genomes > Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) > gi|301627002|gb|XP_002942671|

Domain assignment for gi|301627002|gb|XP_002942671| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|301627002|gb|XP_002942671|
Domain Number 1 Region: 3757-3961
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.48e-38
Family Laminin G-like module 0.0005
Further Details:      
 
Domain Number 2 Region: 1512-1528,3413-3585
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.55e-34
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 3 Region: 347-433
Classification Level Classification E-value
Superfamily Immunoglobulin 6.35e-21
Family I set domains 0.012
Further Details:      
 
Domain Number 4 Region: 1827-1915
Classification Level Classification E-value
Superfamily Immunoglobulin 9.39e-20
Family I set domains 0.012
Further Details:      
 
Domain Number 5 Region: 3242-3327
Classification Level Classification E-value
Superfamily Immunoglobulin 1.35e-18
Family I set domains 0.0075
Further Details:      
 
Domain Number 6 Region: 3319-3407
Classification Level Classification E-value
Superfamily Immunoglobulin 1.81e-18
Family I set domains 0.009
Further Details:      
 
Domain Number 7 Region: 2691-2775
Classification Level Classification E-value
Superfamily Immunoglobulin 2.24e-18
Family I set domains 0.011
Further Details:      
 
Domain Number 8 Region: 1549-1642
Classification Level Classification E-value
Superfamily Immunoglobulin 4.18e-18
Family I set domains 0.042
Further Details:      
 
Domain Number 9 Region: 3596-3696
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.06e-17
Family Laminin G-like module 0.0059
Further Details:      
 
Domain Number 10 Region: 2876-2963
Classification Level Classification E-value
Superfamily Immunoglobulin 1.39e-17
Family I set domains 0.012
Further Details:      
 
Domain Number 11 Region: 2215-2299
Classification Level Classification E-value
Superfamily Immunoglobulin 2.08e-17
Family I set domains 0.029
Further Details:      
 
Domain Number 12 Region: 2501-2599
Classification Level Classification E-value
Superfamily Immunoglobulin 3.35e-17
Family I set domains 0.028
Further Details:      
 
Domain Number 13 Region: 2778-2864
Classification Level Classification E-value
Superfamily Immunoglobulin 3.74e-17
Family I set domains 0.015
Further Details:      
 
Domain Number 14 Region: 2583-2683
Classification Level Classification E-value
Superfamily Immunoglobulin 5.85e-17
Family I set domains 0.023
Further Details:      
 
Domain Number 15 Region: 2971-3062
Classification Level Classification E-value
Superfamily Immunoglobulin 7.95e-17
Family I set domains 0.01
Further Details:      
 
Domain Number 16 Region: 1641-1728
Classification Level Classification E-value
Superfamily Immunoglobulin 9.65e-17
Family I set domains 0.0000463
Further Details:      
 
Domain Number 17 Region: 1741-1822
Classification Level Classification E-value
Superfamily Immunoglobulin 9.74e-17
Family I set domains 0.021
Further Details:      
 
Domain Number 18 Region: 2313-2399
Classification Level Classification E-value
Superfamily Immunoglobulin 8.89e-16
Family I set domains 0.014
Further Details:      
 
Domain Number 19 Region: 3051-3143
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000103
Family I set domains 0.035
Further Details:      
 
Domain Number 20 Region: 2022-2107
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000418
Family I set domains 0.014
Further Details:      
 
Domain Number 21 Region: 1924-2009
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000495
Family I set domains 0.019
Further Details:      
 
Domain Number 22 Region: 2119-2202
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000181
Family I set domains 0.027
Further Details:      
 
Domain Number 23 Region: 3159-3236
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000197
Family I set domains 0.019
Further Details:      
 
Domain Number 24 Region: 2403-2489
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000045
Family I set domains 0.038
Further Details:      
 
Domain Number 25 Region: 265-302
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000157
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 26 Region: 706-758
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000198
Family Laminin-type module 0.0043
Further Details:      
 
Domain Number 27 Region: 224-261
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000223
Family LDL receptor-like module 0.0009
Further Details:      
 
Domain Number 28 Region: 1434-1486
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000446
Family Laminin-type module 0.0064
Further Details:      
 
Domain Number 29 Region: 125-163
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000301
Family LDL receptor-like module 0.00095
Further Details:      
 
Domain Number 30 Region: 309-351
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.00095
Further Details:      
 
Domain Number 31 Region: 769-882,1066-1081
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000377
Family Growth factor receptor domain 0.0084
Further Details:      
 
Domain Number 32 Region: 1493-1541
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000502
Family Laminin-type module 0.046
Further Details:      
 
Domain Number 33 Region: 3700-3743
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000176
Family EGF-type module 0.012
Further Details:      
 
Domain Number 34 Region: 1094-1139
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000847
Family Laminin-type module 0.044
Further Details:      
 
Weak hits

Sequence:  gi|301627002|gb|XP_002942671|
Domain Number - Region: 669-708
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00312
Family EGF-type module 0.048
Further Details:      
 
Domain Number - Region: 1398-1436
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00439
Family Integrin beta EGF-like domains 0.075
Further Details:      
 
Domain Number - Region: 1155-1198
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00725
Family Laminin-type module 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301627002|gb|XP_002942671|
Sequence length 3985
Comment PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein-like [Xenopus (Silurana) tropicalis]
Sequence 
manvavaqyvlvyyralvnftqsieyspeldnvsspefidlseavvdtleseyhkipgeq
mvsvvyvkvidgdtfveldvgsegysndaeirqvlfsvidsrsiasyitsaqgfqfrrlg
svtpslrpcrddeftctsgdcvpaeyrcdhrhdcrdmsdeleceyevvvtvpqeprittp
gpnlgpvstarpattpprpftrppviattpykpfthkpppdletrqcrrdearcpngqci
prdylcdgekdckdgsdemhcgtpspcepnefkckngrcalklwrcdgdndcgdgsdeln
cptkgpsdtcapdqfvcvqartcipasyqcddeadcpdrsdevgcnppqvitppeesima
srgdtvrftcvaigvptpiitwrlnwghiptssrvsmtsenghgtliirdvkeadqgayt
ceainakgmvfgipdgvlilkphrgpcpegsfyvensarcipcfcfgvtkvcqqtgryrn
qirlrfdvpedfkgvnftvpshvgipplssnqlqidtsveefqlvdlsrrflsidsfwtl
pgqflgnkvdsyggslsfkvrygltrgqsepvrkpdvilvgngrkliyrvqtstqpsivn
qrkiqfteenwqhesgasvtredllmtlqnleaimiqtvydnkmasvgisdivmdttsve
ytqlgpavgveecrcpggyagpscevcaaqfervpggpflgtcsgcncnghasscdpvsg
yclncqhntegpqcnkckagffgdptrgvsdacrpcpcphtdprrrfsdtcfmdvdgqpt
cdscapgytgrrcercaegydgrpmqpggrcepvgnvcdvkgalstgdgscvckshvegn
fcnecksgtfylseknpdgclkcfcmgitrqcsssfwnrdqvsstydsqdrvpftisnag
strtlsesirvtgqseltfsnflnvpqdvyfwvlpdrfkgdkvtsyggelrytitfeapa
gsqplfgqpdvvlqgngiflehsantrtapgfpititvpfrerawrradgqdatrehllm
aladidllmirasyaermvetrisnihmdvavpyptdrqravevehcvcppgysgpscqv
caplallffasktgyfgtcfldrdghptcdscpvgyagrqcercapgyrgdpargqpcta
dggsscpcdlrgsvsdrcdsrrqceckpnvegascgtcrphhfylstenpdgclpcfcmg
vtqqctsstyhrelistpflpgnfqnfalvnrqrssritsgftvemsrhgpqlthssfdq
lgqesyywqlpegyqgdkvasyggklrytltynagirgsalpdadvqitgnditlvayqh
dlrpresksfeivfresswkrpdgqpatrehlmmaladldeilvrasystdmlsssitgv
smetagpsytnlpqaleveecrcppgyqglscqdcapgytrtggglylghcepcycnghs
eschpetgacsnclhntvgescdqcapgfygdasagtpedcqpcacpltnpdnqfsktce
ilgtsgyrctacqpgytgqycercapgytgnpnipgqkcvpegnrsklivrihpqkatls
pggevtlrchvsgnppyyfywtredgrpippsakavgegenlhfsrvqptdsgvyictcr
spesvntskaeivvsaapskpitvtveeqrvqtvrpgsdvtfictakskspaytlvwtrq
hnrklpdramdfngiltirrvqpedagiyvctgsnmydmdegnatlyvqasgtatspnaa
aeprqltvqrgqtaefrctatgtptpavewtggpngglspravvqggvlrfhsvepsdeg
qytcrvhnsagqhfarvdlrvhsgslpevqvspertevregdtvrlycraggtpaatisw
rkeggslppqartertdistlvipsisaadggtylcvgtssagsaqarieviviggrsns
pihgptlriepssdtviegqlvelncvsanpyatvtwhrgggrplspnhqaygsklrilq
astadsgeyicrvtngaatqqasiiititrssgpqqpsgnvpalriepssdtlvegqtle
lnclfpsypnavvtwhrsgqplspnhqvsgprlrilqasvadsgeyicrvttgpvtqkas
ilvtitrasgpsiplgngpavrietssgsvvegqtlelncvvagqpdavvtwhragrlls
pnhqvlgsrlritqasvadsgeyicrtttgtttrqgsimvtithstssghsslitptini
esapdsvaegqtvvlncviegrphqevtwyrpdqplapnhqvsgsrlrithasprdsgey
icriqsgagvqmasimvsiegsslntglgspiriesssetvelgqtielnclaeghpgav
vtwhrsgglplpsnhqvsgsrmrilqaspadsgiyicrvssasgsqeasvtinvhssaqv
pnqfpypilieksadtvsegqtldlncvvvgqpqapvswhrpgasfssnhqisgsrlriv
qastadsgqyvcrhdtgagiqqasisvsilsgaassyrlqspvisidphsatvqrgqnat
fkcrihdgaqpirvtwqmrhnqpmednvhispngsiitivgathknqgsyrcmasnaygm
vhssvnlvvqgrpsvsviphgkirvkegepinvecmgigdprpivswrrtgarenlkqhr
lapldgtavlqipsakpadsgsytcvahnphgstqvhvevhveghvispgaplvladkpv
hvvvtggqatlscsasgnptptitwsklraplpwqhqvvnntliipnvaqqdsgqyicna
snadghaevyvtldvetpayattlpheasvspgepiqiqclahgtppikfqwsrvdgtlp
gqasiqdgvlhidqasasdsgtyrcvasnkvgsseafaqvtvsgggaetgrptasiiprg
pvrvkvgspiylecmgqgdprpvvswrrtgdrqnlkpqqlvpldshavlqilsarpedsg
sytctaqnpsgstqvqvevhvegrvitpgvpkvtaeqplhvvvagdraslsctavgnpap
kitwsklraplpwqheivndtliipkaalqdsgqyicnasnaegysevfvtldvetppya
ttlpdevsvsvgeviqiqclahgtsplkfqwskvngslpdratvrdstlhinlakaadag
tyrcvvgnkvgssktfaqvsvlgkspfavrvsplidtkavsgtaeftctvvgdprariqw
skeggqlpaghqvqggvlripnlesgnegtytcrvssrfgqaqesvrlvlqalpkvrini
rtsvqtvlagnsvefeclalgdprakvtwskvgsrlpadavisggtlrieqvkqsdagqy
rctaandvgevqshvilhvqsvpqiaaqpemkeitagstavfpclasgfpvpditwskle
gdlpsdhqidnnvltilsvkpedagtyvctaanrqgrvtafsmlkvrervvpyftgqpqs
ylslpsikdahkkleikitfrpdtadgmlvysgqkksngadfvsfglvggrpefrfdags
gmatiryptaislgefhtvtlyrnltqgslvvdrhvpvngtsqgkfqgldlneelflggy
shydsisktglnsgfvgcvrqliiqgeevifkdldlsangvsncptcrdrpwlailrsle
pvtlgqwhkvsaervnkdgtlivdgtdpvkrsapgksqglnlktlmylggvdgsvelpsa
anisrhfqgcigevsingkkvdisysftessaigqcydnspcdrmpclhggrcqptgeye
yqclcldgfkgdrcethedqcqihnpclngatckdnrchcpsgysgticehgrtagaedr
dwpvegsggndapglygsffsddsyialpkhvfprsrpeapetieleirtsssegvilwq
gmeeneqgkgkdfislglkdghlvfsyqlgsgeanirsedpvndgewhrivavregklgs
iqidgedsvsgaspgrnimvntkgsvylggapnvktltggkfssgingciknlvilnarp
sqqphqpidlkhhaeaghntkecps
Download sequence
Identical sequences gi|301627002|gb|XP_002942671|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.