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Domain assignment for gi|301627695|gb|XP_002943005| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301627695|gb|XP_002943005|
Domain Number 1 Region: 508-727
Classification Level Classification E-value
Superfamily YWTD domain 1.26e-18
Family YWTD domain 0.00039
Further Details:      
 
Domain Number 2 Region: 271-316
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000262
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 3 Region: 30-70
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000353
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 4 Region: 149-189
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000011
Family LDL receptor-like module 0.00086
Further Details:      
 
Domain Number 5 Region: 192-227
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000223
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 6 Region: 231-269
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000772
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 7 Region: 114-150
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000956
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 8 Region: 356-393
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000183
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 9 Region: 73-110
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 10 Region: 1-28
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000654
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 11 Region: 737-778
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000112
Family EGF-type module 0.03
Further Details:      
 
Domain Number 12 Region: 441-477
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000129
Family EGF-type module 0.011
Further Details:      
 
Domain Number 13 Region: 317-350
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000288
Family LDL receptor-like module 0.0037
Further Details:      
 
Domain Number 14 Region: 402-447
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0001
Family EGF-type module 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301627695|gb|XP_002943005|
Sequence length 949
Comment PREDICTED: low-density lipoprotein receptor-related protein 1B-like, partial [Xenopus (Silurana) tropicalis]
Sequence
frcntdkcipfwwkcdtvddcgdgsdepaecpefkcqpgrfqcgsglcalpaficdgend
cgdnsdelncdtyvclsgqfkctkkqkcipinlrcngqndcgdeedeidcpenscspdhf
qckttkhcisklwvcdedsdcadgsdeancepqtcalkeflcsngdcissrfwcdgeydc
adgsderncetgcskeqfqcstgqcisakwkcdghedcksgedekncepvsptcssseyv
cdsggcvsaylrcngeydcadgsdendcvaeckenqfrcrnrayciplrwfcdgvqdcvd
gsdedncervkflcpptrpfrchnnrvclrteqicngldecgdnsdeaccaarqkvkpck
kdeftcnnkkcisvdlqcdkfddcgdesdeqgckmemgefsceddvnpcgddaycnqtnt
pavchckagfqrnlknrqcedineclllgscshhctnlkgsyrclcdrnflernhsciaq
dtedqvlyvandtevlsftypfrhnakhqqisriaynsritgmdmylqgnmiiwstqfnp
ggiffntfhgrggketksglicpefkrprdiavdwiagniywtdhsrmhwfsyytshwts
lrysinvgqihgpnctrllthiagepyaiavnpkkgmmywtvigdrshieeaamdgtlrr
iivqknlqrptgllyphridifedyiygaglkngafriqkfgngvmeylnlnvektksvl
ishhykqpncncsngkiasscqlcdgycynggtcqldpetnipacicsanwsgkqcerpa
pkssksdntssrsiaiivplvllvtlittlviglllckrrrraktirrqpiinggmnvei
gnpsynmyevdhghndgslldpnfiieldksrfigggptaykiahkappiylnsdlkgpl
npgpnnysnpvyaklfvdghncrnslisieerkellpkkidnviretva
Download sequence
Identical sequences gi|301627695|gb|XP_002943005|

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