SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301631675|gb|XP_002944923| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301631675|gb|XP_002944923|
Domain Number 1 Region: 110-241
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 4.45e-23
Family GntR ligand-binding domain-like 0.01
Further Details:      
 
Domain Number 2 Region: 18-89
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.36e-22
Family GntR-like transcriptional regulators 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301631675|gb|XP_002944923|
Sequence length 247
Comment PREDICTED: HTH-type transcriptional regulator lutR-like [Xenopus (Silurana) tropicalis]
Sequence
maklpmtsdrmataqgptgrplpdeiaasinaqvqrgellpgdrlpserelcerhgvsrs
vvrealsqlksdgiietrrgsgayllerdqrqsfrmqdvaiderdslalvmelivtieva
atrlaatrrtpedlkmirraligmeyeiandrlgdeqdfafhqaiveathnphfialssh
leqgarrvirqarintryrhmdlieavqqehqaifdaikasdadaaahaanahlenaakr
ldmylrc
Download sequence
Identical sequences gi|301631675|gb|XP_002944923|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]