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Domain assignment for gi|52138986|gb|AAH82716| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|52138986|gb|AAH82716|
Domain Number 1 Region: 322-481
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 4.29e-33
Family XPF/Rad1/Mus81 nuclease 0.0019
Further Details:      
 
Domain Number 2 Region: 9-85
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 1.83e-17
Family DNA polymerase beta, N-terminal domain-like 0.0034
Further Details:      
 
Weak hits

Sequence:  gi|52138986|gb|AAH82716|
Domain Number - Region: 201-246
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.000991
Family MarR-like transcriptional regulators 0.081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|52138986|gb|AAH82716|
Sequence length 612
Comment MUS81 endonuclease homolog [Xenopus (Silurana) tropicalis]
Sequence
MPGEITYGRKRPLPACPNPLFLKWLTEWRDSAAEKNLKTQFVYQKAISSLKKYPLPLNSG
KEAKILQNFGDSICKMLDDRLEKHYAECGPNIPIHTVPSSSSTLRKAQRQPKAPSPLSIP
HALEPPEQESQDLSPSKKKKTGGKKQREYVPQRRSGGYAVLLTLYRDTKSPSSRGYMTKA
ELQKEAQPLCDKSFTLTDPNSKYTAWTSVSTLIQKELVIKTHSPARYSLTEKGLELAQRL
EEAEDQGRADGFPRQVQASSNEEEEQEEAESETNPYIHADPVQCPDQQLNLAYSHNAKNT
SSDPPSVQYNHVPEFTLHPGDFNILLCVDFIETTGGAAHRKQELVTELRRNGVNFDVRKL
HIGDFLWIAQEKVQPVPGQLRIPQARELVLDYVVERKRMDDLCGSIIDGRFREQKFRLKR
CGLRRPIYLVEDHGSAQHLSIPETTLQQAIVNTQVVDGFFIKRTKDVRESAAYLTIMTRY
LQGIYSRKSLLSCTKEEEWKCDRSLRPDASSCILVEFKDFNEGAMKNKAQTVKEVFARQL
MQISGVSGEKAAAILEKYSTPASLMSAYESCSSAEEKEKLLSSVKCGKLQRNLGPVLSKT
ISQLYCTKEPLS
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Identical sequences Q640B4
ENSXETP00000061734 NP_001011004.1.99540 gi|52138986|gb|AAH82716| gi|58332418|ref|NP_001011004| gi|82180810|sp|Q640B4|

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