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Domain assignment for gi|56789651|gb|AAH88610| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|56789651|gb|AAH88610|
Domain Number 1 Region: 727-942
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.39e-105
Family Thrombospondin C-terminal domain 0.0000000968
Further Details:      
 
Domain Number 2 Region: 600-725
Classification Level Classification E-value
Superfamily TSP type-3 repeat 1.7e-33
Family TSP type-3 repeat 0.00000379
Further Details:      
 
Domain Number 3 Region: 518-602
Classification Level Classification E-value
Superfamily TSP type-3 repeat 3.79e-18
Family TSP type-3 repeat 0.0000692
Further Details:      
 
Domain Number 4 Region: 228-273
Classification Level Classification E-value
Superfamily Assembly domain of cartilage oligomeric matrix protein 0.00000000000000222
Family Assembly domain of cartilage oligomeric matrix protein 0.0018
Further Details:      
 
Domain Number 5 Region: 453-543
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.0000000000248
Family TSP type-3 repeat 0.00019
Further Details:      
 
Domain Number 6 Region: 57-172
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0000000673
Family Laminin G-like module 0.01
Further Details:      
 
Domain Number 7 Region: 319-354
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000165
Family EGF-type module 0.023
Further Details:      
 
Weak hits

Sequence:  gi|56789651|gb|AAH88610|
Domain Number - Region: 366-410
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000179
Family EGF-type module 0.021
Further Details:      
 
Domain Number - Region: 419-454
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000419
Family EGF-type module 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|56789651|gb|AAH88610|
Sequence length 959
Comment Thrombospondin 3 [Xenopus tropicalis]
Sequence
MARQSRDLLLLLLLSCLVCWARAARQEVHVIDLLTVSESRHMSGVVEKIRSELLAVNDLY
FLSTFRLPPKAGGVLFGLYSKKDNTKWLEASIVGKINKVLVRYMREDSKLHAVSLQNANL
SDGNMHTMILRVSGFRGDTLSLELYVDCKQVDTSLGLPEMMIIPQFEVESGDIRSGHKAY
LRMQGSVESMKLILGGSLSRVGALSECPFQEDESIHNTVNGVVNSILGEHTKALIAQMTL
FNKVLAELREDIRDQVKEMSLIRNTIMECQVCGFHEHRSRCNPNPCFQGVDCMETYEYPG
FRCGPCPPGSQGNGTHCADIDECSHANPCFSGSKCINTSPGFRCEHCPRGYKGNTVSGVG
VDYAKASKQVCKDIDECNDGNNGGCDANSICTNTVGSFRCGPCKPGFVGNQTVGCAPKKS
CASPAFNPCHLNGHCVFERSGDITCACNVGWAGNGYTCGRDTDLDGYPDEPMPCIDNNKH
CRQDNCRLTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSFGD
ACDNCPNVPNNDQRDTDANGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDLDGVGDA
CDSCPEASNPTQADADSDLVGDMCDTNQDRDGDGHQDTKDNCPDIPNSSQLDSDNDGKGD
ECDQDDDNDGIPDYMPPGPDNCRLMHNPNQKDSDGDGVGDVCEEDFDNDTVIDPLDVCPE
SAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDF
EGTFHVNTVTDDDYAGFIFSYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGLQLKAVKS
TTGPGEQLRNALWNTGHTQDQVRLLWKDPRNVGWKDKTSYRWQLMHRPQVGYIRVKLYEG
VDLVADSGVIIDTNMRGGRLGVFCFSQENIIWSNLQYRCNDTIPEDFEPYRRGLQEGKD
Download sequence
Identical sequences Q5M7J5
NP_001011401.1.99540 gi|56789651|gb|AAH88610| gi|58332658|ref|NP_001011401|

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