SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|62859689|ref|NP_001015958| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|62859689|ref|NP_001015958|
Domain Number 1 Region: 30-357
Classification Level Classification E-value
Superfamily (Trans)glycosidases 4.48e-104
Family Glycosyl hydrolases family 35 catalytic domain 0.0000937
Further Details:      
 
Domain Number 2 Region: 474-639
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.82e-38
Family beta-Galactosidase/glucuronidase, N-terminal domain 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|62859689|ref|NP_001015958|
Sequence length 648
Comment galactosidase, beta 1-like precursor [Xenopus (Silurana) tropicalis]
Sequence
MMWLRTFLRIFLLMVPYGSVSVSTTSSRTFEIDFEHNCFRKDGQPFRYISGSIHYSRVPQ
YYWKDRLLKMKMAGLDAIYTYVPWNFHETKPGVYNFSGDHDIESFLKLANEIGLLVILRA
GPYICAEWDMGGLPAWLLAKESIVLRSSDPDYLQAVDNWMGVFLPKMKPFLYHNGGPIIS
VQVENEYGSYFTCDYNYLRHLLQLFRHHLGDEVVLFTTDGSGLQYVRCGTIQGLYTTVDF
GPGSNVTETFSVQRYCEPKGPLVNSEFYTGWLDHWGEPHSVVATEMVTKSLDEILAHGAN
VNMYMFIGGTNFGYWNGANTPYAPQPTSYDYDAPLSEAGDLTDKYFAVREVIKKYKQIPE
GPIPPTTPKYAYGEIKMEKVKTVTEALDILASHGAIQGTYPLTFDQMKQYFGFVLYRTTL
PINCSNPTTLTTLSNGVQDRAYVTVNGVPQGVLERDKQTAINVTGVAGAELDLLVESMGR
VNFGRYNNDFKGLLTNVTLNGELLVNWTMYPLDIDSAVNGGLLSTIHIPYASAFSAPMFY
KGSLIIPTGIPDLPQDTFIQFPGWTKGQIWINGFNLGRYWPVRGPQVTLYVPRSILTTTL
VNNITVLELENSPCNSGKCVVEFVDKPVLNKVKQIVDEHKFSKEKFLK
Download sequence
Identical sequences Q28E48
gi|62859689|ref|NP_001015958| gi|89271933|gb|CAJ82193| NP_001015958.1.99540

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]