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Domain assignment for gi|66792544|gb|AAH96502| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|66792544|gb|AAH96502|
Domain Number 1 Region: 1-254
Classification Level Classification E-value
Superfamily Sema domain 1.7e-101
Family Sema domain 0.0000000232
Further Details:      
 
Domain Number 2 Region: 250-301
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000115
Family Plexin repeat 0.0021
Further Details:      
 
Domain Number 3 Region: 317-398
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000351
Family I set domains 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|66792544|gb|AAH96502|
Sequence length 487
Comment sema3c protein [Xenopus (Silurana) tropicalis]
Sequence
RVCPNDIGGQRSLVNKWTTFLKARLVCSVMDDDGTETYFDELEDVFLMETDNPRTTLVYG
IFTTSSSVFKGSAVCVYHMSDIQTVFNGPFAHKEGPNHQLIPYQGRIPYPRPGTCPGGAF
TPNMKSTKEFPDDVVTFIRNHPLMFNSIYPTLKRPLLIRTGTDYKFTKIVVDRVNAADGK
YHVLFLGTDKGTVQKVVVVPANGSASGELILEEMEVFKSHAPITSMKISSKKQQLYVSSE
EGITQLSLHRCHIYGTACADCCLARDPYCAWDGKFCSRFYPSGKRRSRRQDVKHGNPVTQ
CRGFNLKGYRNTAEIVQYGVRNNTTFLECIAKSPQASVKWLLQKDNDRRKEVKLNERIIA
TGQGLLIRSVQEVDQGLYHCIATENTFKQTIAKVNLKVLEPELVTFMTDKSQWLWASTLS
GMQFHPKDLTGAFSHSEMQIINQYCKESRQKTRQEAENQKMRGDYSKLKVLLNTRKSRNR
RNHFPGS
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Identical sequences Q4VA84
gi|66792544|gb|AAH96502|

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