SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Lus10013968|PACid:23170043 from Linum usitatissimum v200

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Lus10013968|PACid:23170043
Domain Number 1 Region: 688-973
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.05e-71
Family Protein kinases, catalytic subunit 0.00015
Further Details:      
 
Domain Number 2 Region: 103-359,503-595
Classification Level Classification E-value
Superfamily RNI-like 2.35e-66
Family 28-residue LRR 0.055
Further Details:      
 
Domain Number 3 Region: 315-474
Classification Level Classification E-value
Superfamily L domain-like 3.03e-29
Family Polygalacturonase inhibiting protein PGIP 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Lus10013968|PACid:23170043
Sequence length 1007
Sequence
MHHLPLFHLAAGVLLLLLLLPSPSISLTQEALILLQAKLSFSDPDSSLSSWNSSSDPSSP
CSWNLVKCDPITRSVTSLDFNSANLAGPFPTILCRLRSLNFISFFNNAINGTLPPEISTC
KSLVHLDLSQNFLTGTIPDTLPDIPNLKYLDLTGNNFSGEIPPSFGRFEQLEVFAVVYNL
LDGTIPPFLGNISSLRMLNMSYNPFRPGRIPPEIGNLTNLEVLWLTECNLVGEIPSSLGR
LKKLTDLDLAINGLVGELPSSLTELPNLVQLELYNNSLTGELPNGMGNLTALRLLDASMN
QLTGTIPDGLCQLPLESLNLYENQLEGDLPASIGSSRNLYELRLFGNKLTGELPQNLGRN
SPLRWVDVSNNLFTGPLPPALCSKGELEELLAIYNSISGALPGGLSECRSLTRIRLGYNK
LSGEIPVNFWGLPHVSLVDLVSNSFSGEIAKTIAGASNLSMLILDKNGFTGPIPEEIGWV
GSLVEFSANGNNLSGGLPGSLVNLKQLGKLDLHGNQISGEIPSGIDSWKKLNELNLGENR
FSGEIPSSIGKLSVLNYLDLSGNNLAGEIPASLQNLKLNQLNLSNNKLSGEIPPLYAKET
YKNSFLGNPGLCGEIPGLCAGKGRRNNRGEDYAWLLRSMFILAAVVFVVGVVWFYVKYKN
IQEVTKSAAGVIDKSKWTLMSFHKLGFSEYEILDALDEDNVIGSGSSGRVYKVVLSNGEM
VAVKKLWGSGGLMNKELFENGGDGFDAEVRTLGKIRHKNIVKLWCCCVTKDCKLLVYEYM
VNGSLGDLLHGSKSGLLDWPTRFKIILDAAEGMSYLHHDCVPPIVHRDVKSNNILLDGEF
GARVADFGLAKVVDSSAGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVVLELV
TGRLPVDPEFGEKDLVKWVRTTIDQKGVDHILDTKLDSCFKEEICRVLNIGIICTSHLPI
NRPSMRRVVKMLQEIGGDAREKAAAAMQDSKLTPYYYEDGSDHGSVV
Download sequence
Identical sequences Lus10013968|PACid:23170043

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]