SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|292654719|ref|YP_003534616.1| from Haloferax volcanii DS2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|292654719|ref|YP_003534616.1|
Domain Number 1 Region: 3-215
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4.32e-48
Family DNA gyrase/MutL, N-terminal domain 0.00000736
Further Details:      
 
Domain Number 2 Region: 532-723
Classification Level Classification E-value
Superfamily DNA mismatch repair protein MutL 1.19e-43
Family DNA mismatch repair protein MutL 0.0057
Further Details:      
 
Domain Number 3 Region: 192-327
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 3.57e-33
Family DNA gyrase/MutL, second domain 0.00063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|292654719|ref|YP_003534616.1|
Sequence length 735
Comment DNA mismatch repair protein MutL [Haloferax volcanii DS2]
Sequence
MSDIKQLDEKTVQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDD
GVGMSEEDLELAVREHTTSKIGDIEDLEAGVGTLGFRGEALHTIGAVSRLTIRSKPRGGD
VGTELQYEGGEVESIRPAGCPKGTVVEVDDLFYNTPARRKFLKTTATEFDHVNAVVTHYA
LANPDVAVSLEHDDREVFATEGRGDLQSTVLSVYGREVAESMVPVDHDAPGVSVSGLVSH
PETTRSTRDYLSTFVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNV
HPRKMEVRWDDEAGVKREVTEAVEDALLSHGLVRSSAPRGRSKADEAAIEPGSSGDDATQ
LDPHEVRESEPDGETDDDADPPSARDVQSAREARESGARADSTATDDADTDTTPATERNS
GAGSGDPAAGDDSGASAETTESSGPTSVPSSAPPTPPREYDLAPGPETTEQSSLSTDDGS
ESRSTPDEASSVDSGADDNAPRSPPSRIAAPTTQRDLSGEEADLSPEFDSLPSMRIIGQL
SDTYIVAETDEGLVLVDQHAADERVNYERLRGEVEGDTPTQALAEPVDLELTAREAALFE
EYREALAQVGFHAGRTGERTVSVRTVPAVFDAALDPELLRDALTAFVREEVDGGRKTVDA
VADELLSDLACYPSITGNTSLREGSVLDLLAALDDCENPYACPHGRPVIVEFDRDEIASR
FERDYPGHGGRRREE
Download sequence
Identical sequences D4GSE8 L9UMB1
WP_004044380.1.66890 WP_004044380.1.84848 gi|292654719|ref|YP_003534616.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]