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Domain assignment for gi|284928612|ref|YP_003421134.1| from cyanobacterium UCYN-A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|284928612|ref|YP_003421134.1|
Domain Number 1 Region: 26-341
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.28e-67
Family RNB domain-like 0.00027
Further Details:      
 
Weak hits

Sequence:  gi|284928612|ref|YP_003421134.1|
Domain Number - Region: 544-613
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.000864
Family Double-stranded RNA-binding domain (dsRBD) 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|284928612|ref|YP_003421134.1|
Sequence length 622
Comment exoribonuclease R [cyanobacterium UCYN-A]
Sequence
MTLSAITYSELKNFLVGSLPTKERKAFLGFTIDSKNAKDLDDAIWIEPCDSGAIILIHVS
DTTSLIPEKSQLEEKALKQIETYYWAASTNPLFPNELSENKLSLLEGHPRLTVTVKITLD
KTANIKNTQLLSTSLISIKKFSYTAADKTLEDVSQPLSRMLRYCELWAQKLSQKRKYTGA
FGQSTIQGISLDEEGRLTETSVYRSQRIIQEFMVLANTAIANLAEQHKLSILYRNHTCST
IAPKNKLLIETLVSLGLPKLIHQKLQNWLNSANYSPTVISHFALCVPAYTHFTSPIRRIA
DYLNHQILKAVFIEQKKNPYIFKELEKVSQYINQEQVKIKEQRTNYFQIEHLEKVASILD
NQNKISLLSNREFSQILKDSFKTFQLDKIAVEAKQRLKQRILKPCDLYYLTFGKYRNSKN
KKLIKDELLDYFKEKIVLATQTLQIASTILQKDINYIEKLTPSGQFVFWTIFEDKIIQQP
SVAFNKQETKHKSNFFWIKGKLEGTLCSPNTINLNTIKKNNTLKVISTVENKINFLKISK
PEIDNPITYVHTILKCMKIKKPMYLYNKVGTKWQCYCYFKWINNINIVTTSIAKTKKEGK
ANTSLKLIIHLENYLFITSLSN
Download sequence
Identical sequences D3EMS6
gi|284928612|ref|YP_003421134.1| WP_012953441.1.87152

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