SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|302875242|ref|YP_003843875.1| from Clostridium cellulovorans 743B

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|302875242|ref|YP_003843875.1|
Domain Number 1 Region: 17-24,83-329
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000000203
Family Pectin methylesterase 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|302875242|ref|YP_003843875.1|
Sequence length 408
Comment hypothetical protein Clocel_2395 [Clostridium cellulovorans 743B]
Sequence
MIKLRNRKKFEIRFLIFSLLLFSFACIYNYSENKYSEVEKTKEINQSSTYVQNKEESKEI
ISRSLGDYPLQANEIGVTDERYSYGDVRRYGVFPYDNSLLNNYKLVKNALDNARNLGYEV
FFPKGLYKTQLNISQSNLVIRFEEGAELTGLVHIFVENSKNKIKNITIRGTIVTYDRFGT
RNVDGLTVDAIHVKSDGLKATDYPNIKGRGVHISPGTTNMKCKLIEVDDLDSAGHNNVAA
VEIDGASNNPSNLFIGKIWVKKSDVHGVYLTGNRHIIGEIQVDEYGADAYKMKSSIEDSD
SIKQSKELKGVWLNKCSDTIIKNITVKNVNTIRPNVKCDVFLDEVGKGKNTKSVRIDNIK
CFPVGKSEGVIISNSSYIINNISAQNSNGESFVVMDKSSKAIVKNIIE
Download sequence
Identical sequences D9SPX5
gi|302875242|ref|YP_003843875.1| WP_010074437.1.47838

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]