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Domain assignment for gi|14601411|ref|NP_147948.1| from Aeropyrum pernix K1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|14601411|ref|NP_147948.1|
Domain Number 1 Region: 16-176,206-220
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 7.09e-51
Family Ribonuclease PH domain 1-like 0.00000543
Further Details:      
 
Domain Number 2 Region: 192-275
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 5.24e-21
Family Ribonuclease PH domain 2-like 0.00073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|14601411|ref|NP_147948.1|
Sequence length 276
Comment exosome complex RNA-binding protein Rrp42 [Aeropyrum pernix K1]
Sequence
MSITPHRLPVAPVIVREAYLSLLRKGWRPGDRDLKTPRNVKIETGIIEKAEGSALVKLGK
TQVIAGVKAGVGAPFKDTPNQGVLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLRE
VGAVDLESLVIRPGEKVWVLWVDLYIIDHDGNLFDASMLATMAVLLTARLPRYEESETGE
IIISKEGEGEELKVKTRVVTVTTAKIDRYIVVDPNIEEEAVSDVRLVTAVDENGRIVGLQ
KTGMGSLTEADIETMIGYSLEASKVYFKALEEAIKP
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Identical sequences Q9YC05
gi|14601411|ref|NP_147948.1| 355769 ape001001445.1 ape001001445.2 ape001001445.3 272557.APE_1445

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