SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for AT1G07920.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AT1G07920.1
Domain Number 1 Region: 3-249
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.33e-80
Family G proteins 0.0000000287
Further Details:      
 
Domain Number 2 Region: 326-430
Classification Level Classification E-value
Superfamily EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 2.45e-41
Family EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 0.00000528
Further Details:      
 
Domain Number 3 Region: 226-321
Classification Level Classification E-value
Superfamily Translation proteins 2.87e-28
Family Elongation factors 0.000011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) AT1G07920.1
Sequence length 449
Sequence
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
Download sequence
Identical sequences A0A178WJC9 D7KHX1 P0DH99 Q0WL56 Q8GTY0 Q8W4H7
NP_001030993.1.80155 NP_001119464.1.80155 NP_001318848.1.80155 NP_001320767.1.80155 NP_001320768.1.80155 NP_200847.1.80155 NP_563799.1.80155 NP_563800.1.80155 NP_563801.1.80155 WP_068857391.1.37356 XP_002864684.1.15461 XP_002889674.1.15461 jgi|Araly1|470837|fgenesh2_kg.1__791__AT1G07930.1 jgi|Araly1|496177|fgenesh2_kg.8__1993__AT5G60390.1 AT1G07920.1 AT1G07930.1 AT1G07940.1 AT1G07940.2 AT5G60390.1 AT5G60390.3 AT1G07920.1 AT1G07930.1 AT1G07940.1 AT5G60390.1 3702.AT1G07920.1-P 3702.AT1G07930.1-P 3702.AT1G07940.1-P 3702.AT5G60390.3-P 59689.fgenesh2_kg.1__791__AT1G07930.1 59689.fgenesh2_kg.8__1993__AT5G60390.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]