SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|296242288|ref|YP_003649775.1| from Thermosphaera aggregans DSM 11486

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|296242288|ref|YP_003649775.1|
Domain Number 1 Region: 11-202,400-646
Classification Level Classification E-value
Superfamily Nucleotidylyl transferase 5.63e-124
Family Class I aminoacyl-tRNA synthetases (RS), catalytic domain 0.000000248
Further Details:      
 
Domain Number 2 Region: 652-871
Classification Level Classification E-value
Superfamily Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 5.42e-58
Family Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.0000306
Further Details:      
 
Domain Number 3 Region: 204-400
Classification Level Classification E-value
Superfamily ValRS/IleRS/LeuRS editing domain 3.77e-53
Family ValRS/IleRS/LeuRS editing domain 0.0000347
Further Details:      
 
Weak hits

Sequence:  gi|296242288|ref|YP_003649775.1|
Domain Number - Region: 945-1032
Classification Level Classification E-value
Superfamily Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.00916
Family Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|296242288|ref|YP_003649775.1|
Sequence length 1057
Comment isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Sequence
MNTNEWRLEGRYIPHSVENTVLKYWKDKNIYRLVKSRNSERTRKFNFIDGPPYTSGDIPH
IGTAWNKSLKDAILRYKRMQGYKVYDQPGYDCHGLPIEVKVEQKLGVRFKKEIEEKIGID
RFIAECRRLALDNASAMTKWFIDLGVFMDWDNLYLTLKNEYIEAAWWLVKKADEQGLLDK
DTRIVHWCPRCSTTLAEYEIEYKELEDPSIYVKLPVVGQDKTYLVIWTTTPWTLPANTFV
MVHPEAYYVKIKVGDEIWVVAEERLKAFLDETGIKDYQLVERVKGSSLVGVRYTHPLKDL
VSIQQELEQYHVVLPAPEFVTMYEGTGLVHSAPGHGFEDFTVAVRHGIRFIASPVDDEGR
FTMEAGKYAGMFVRDANPVIIKDLRERNALIASSSIVHNYPVCWRCKTPVFLRATQQWVI
KVSRLKDKLQQEVEKINWMPEWALDRMKNMLENLQDWVISRQRYWGTPLPIWTCPSGHRI
VVESVEDIKARGGKLPSELHKPWIDEVVLKCPVCGLEMHRVPDVMDVWFDSGVCFYAAKG
HPKKLSLDDIILDFIAEGHDQIRGWFFSLLRAGVLGFDLAPYKNVLVHGFMLDEQGREMH
KSLGNYVGTDEAIAKAGRDPLRLWLLSNTTWEDAKFSWKSIEEVARDLSIAWNVFVFAKT
YMVLDGFKPEQYTLEDLMDSLRLEDKWILSRTNTLIQKITHLLDNYEVHTAVRMLREFIV
EDLSHWYIRLIRPRVWIEENTRDKLAAYTVLYYVLDRLVRMLSPFTPFITEYIYQAMFKE
KYKEESVHLLEWPKPEESLINPELEEAMIVLKKIFEAAASARMKAGLKLRQPVKTLTVYV
NDPRISEIVVKNQDIIKLIANVKTVETKPLSMLKEVTKYRVEPVYSVLGPRFKQRTRLVI
AYIAENQDKIALDILGKKAHETVIEGEKIVIDESCVKITPYFIEGYSVVDTDWGSIAIDT
RLSEEEVAEGLTRDLVRRIQVMRKMLNLPLDAKIRVVITTPPDKERIVLSKSDYIAGETR
AVEVKVSANPSVLTELKGLVKEWDIDGETYNIGVEQV
Download sequence
Identical sequences D5U123
WP_013129416.1.1770 gi|296242288|ref|YP_003649775.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]