SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|27381921|ref|NP_773450.1| from Bradyrhizobium japonicum USDA 110

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|27381921|ref|NP_773450.1|
Domain Number 1 Region: 84-218
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 4.71e-25
Family GntR ligand-binding domain-like 0.0063
Further Details:      
 
Domain Number 2 Region: 14-81
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.29e-19
Family GntR-like transcriptional regulators 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|27381921|ref|NP_773450.1|
Sequence length 236
Comment transcriptional regulator [Bradyrhizobium diazoefficiens USDA 110]
Sequence
MQLMKSNVELASDSIVDRVYEQLKAMAVSYEFKPGERLNEGELAKRLGVSRTPLREALNR
LNTEGFLRFTPGKGFFCRELDAHEIFDLYELRKSIEVASVRLAIKRAKDEDIDALLKFLE
ATGPDPGERSSVELVELDETFHERLMAMSNNAEMLRVLRNVNARIRFVRWIDMDRVNRSN
TQAEHRAVVEGLKARNEEACVSVLEKHIDRRLDRITSAIKEGYAQIYMPAARSAAN
Download sequence
Identical sequences A0A0E4BL28 A0A0M9B5Q4 Q89F91
224911.bll6810 NP_773450.1.11505 WP_011089549.1.15658 WP_011089549.1.2739 WP_011089549.1.53516 WP_011089549.1.53518 WP_011089549.1.67972 WP_011089549.1.69380 WP_011089549.1.90507 gi|27381921|ref|NP_773450.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]