SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSBTAP00000028621 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSBTAP00000028621
Domain Number 1 Region: 676-705
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000602
Family CCCH zinc finger 0.0031
Further Details:      
 
Domain Number 2 Region: 786-806
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000877
Family CCCH zinc finger 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000028621   Gene: ENSBTAG00000021472   Transcript: ENSBTAT00000028621
Sequence length 944
Comment pep:known_by_projection chromosome:UMD3.1:14:2354390:2418557:1 gene:ENSBTAG00000021472 transcript:ENSBTAT00000028621 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEEKEQLRRQIRLLQGLIDDYKSLHGSASAPGTSAALGTSTTSQWQPPTYNSSRTFSARY
PRPSRRGFSLNHGPAWRKKYSLVNRPLGSSDPPGDGAAQPPLRAGSSQGPEPQEYILERQ
VQLNPDQNMVIKIKPPSKPGSASTAGVLRTSLEEYEDPPWNDHRPQEGEGESSGAQRQPS
RQGRAKGGCSAEDPLLVCQKEAGKPRVVKSVSSVSENPLEPRRTVSESAVAVRARVLPSS
LPQRGGMALGRKAGSHSVASSVTQLRGDGSANTGLSGPSAASSLVVGPARPAVGPRQTRE
PSVLVSCRTNKFQKNNYKWVAASAKSPRASRRALSPRAAAENVCKAPFAAAERTEKPQLK
ADPDAKPRRPAVSSVPGASPSKYKWKASSPSASSASSFRWQSEVGSKDRASQLSPIPSRS
PPADRRAVEPSSLQPVFSETPLSAYKVKSRTKIIRRRGSASLPADKKSSPPPAAVAKSQF
SLRRKQALRGKSSPVTKKTPNKGLMPVTKPRPCCLPPGRAYVPSKEASSLHGQRPPPTSK
VIRTRYRIVKKTPTSPLSTTPGPPALPSWRARRLSLSRSLALNTLRPATGGRAQTGSPRW
RSKGYRCIGGVLYKVSANKLSKTCSRLGGDGGGRPLLRTGRLDPASSCSRSLASRAVQRS
LAIVRQARQARQRRRRRKEEYCMYYNRFGRCNRGERCPYVHDPEKVAVCTRFVRGTCKKT
DGTCPFSHHVSKEKMPVCSYFLKGICSNSSCPYSHVYVSRKAEVCTDFLKGYCPLGAKCK
KKHTLLCPDFSRRGVCPRGAQCQLLHRNPKRLGRRAATPTAPEPGNTPPRSRASTSHGPR
KPSAALRPARRMSSPPSSMAAGSTSPPSSPRVLAAASPSXLEPEELCLQAAEASAGAGSG
GLSKLPSFIALQSSPSPGGQPRAQAPRSASSKDSGKSLHIKPRL
Download sequence
Identical sequences F1MXR8
ENSBTAP00000028621 ENSBTAP00000028621

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]