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Domain assignment for ENSBTAP00000049195 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000049195
Domain Number 1 Region: 128-217
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.58e-36
Family SCAN domain 0.0000259
Further Details:      
 
Domain Number 2 Region: 476-527
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000292
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 3 Region: 321-350
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000196
Family KRAB domain (Kruppel-associated box) 0.0034
Further Details:      
 
Domain Number 4 Region: 428-455
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000184
Family Classic zinc finger, C2H2 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000049195   Gene: ENSBTAG00000038534   Transcript: ENSBTAT00000056703
Sequence length 532
Comment pep:known_by_projection chromosome:UMD3.1:18:65906273:65910529:1 gene:ENSBTAG00000038534 transcript:ENSBTAT00000056703 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QRPEVSSISAVGESSGAGAKGERLPGRGGRPPKPAAPQMPHGGTGRPSVMRGLRERAPAL
RPLLCSRAEAHGKRSPTGGGRGLGADHHLAVPWKLHPTPSGSRKIPRTMPSPLGPPNLPS
LDPEAIPENPETARQRFRGFCYQEVAGPRVALARLQFLCHQWLQPEAHSKEQILDLLVLE
QFLGALPPEIQAWVRGQQPGSPEEAVVLVEDLQRDPGQLLGWITAHVLQQAVLPATQKTE
ELVGGVHPSGTVEPLRAASGEGPKDAQMEGNAQLSCSVKEEPDGYMQEIASSSPPPPAQS
HKEHVEQQEPTSAPFQPPRLQEWGLLEPSQKELYWDAMLEKYGTVVSLGEDPSPCPGPWA
HLASQRFPRAGLPHPLPESRAESQPEVLSTGSEGRRRLRPGLLHSPGDESEGRPGGPEAP
PPPPPPRSKPYTCTQCGGAFDWKSVFVIHRRAHAGGPCTEKPPAGPPQRALPGPRGYACE
ECGHSFSWKSQLVIHRKGHAGQRRHLCADCGHSFDWKSQLVIHRKSHRPEAP
Download sequence
Identical sequences F1MU53
ENSBTAP00000049195 ENSBTAP00000049195

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