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Domain assignment for ENSBTAP00000049589 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000049589
Domain Number 1 Region: 10-95
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.58e-29
Family SCAN domain 0.00045
Further Details:      
 
Domain Number 2 Region: 193-244
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.17e-19
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 3 Region: 229-281
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.59e-16
Family Classic zinc finger, C2H2 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000049589   Gene: ENSBTAG00000039081   Transcript: ENSBTAT00000054524
Sequence length 281
Comment pep:novel chromosome:UMD3.1:18:63754418:63757389:-1 gene:ENSBTAG00000039081 transcript:ENSBTAT00000054524 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PQDTLMENSDCDQENWHVRFRTFSSSEESDPVEDLRRLRELCHLWLRPDLHTKEQMMDRL
VLEQFMICMPLECQVLLKESGVQSCKALEDMLRNKQKPKNWVEAKAGDMDNERDPCREPQ
PPMTVIPPEDGQEGSPELQNLPGATNLSREQVRACKQVEESQAFFLITVRMKIIHLCPSE
TWSIRSRYEADGELILHQRTHTGERPFQCDICAKGFIQLSHLRVHEQIHTGKKPYSCDLC
LKKFTHDSTLRAHKRTHTQEKPFRCEHCDRAFSHRGNLSVH
Download sequence
Identical sequences G5E698
ENSBTAP00000049589 ENSBTAP00000049589

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