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Domain assignment for ENSBTAP00000023585 from Bos taurus 69_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000023585
Domain Number 1 Region: 46-139
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 6.41e-39
Family SCAN domain 0.0000606
Further Details:      
 
Domain Number 2 Region: 638-695
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.74e-26
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 3 Region: 470-527
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.73e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 4 Region: 582-639
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.36e-24
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 5 Region: 526-583
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.26e-24
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 6 Region: 414-471
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.54e-23
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 7 Region: 680-732
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.31e-20
Family Classic zinc finger, C2H2 0.004
Further Details:      
 
Domain Number 8 Region: 362-415
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.83e-19
Family Classic zinc finger, C2H2 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000023585   Gene: ENSBTAG00000003622   Transcript: ENSBTAT00000023585
Sequence length 749
Comment pep:known chromosome:UMD3.1:22:16415882:16442510:1 gene:ENSBTAG00000003622 transcript:ENSBTAT00000023585 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MATQGRGTSGLFPRGAVLQRQEGCLTVKQEPGSPTWGHGCSLQKNHPPVCEIFRLHFRQL
CYHEMSGPQEALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQMHHPE
SGEEAVAVVEDFQRYVSGPGEVSTPGQEQEIHSEEKTALGATHESPSTSPHSEGSAPGAH
LEPPRDPGAHHHLSTQSASPVPTLPQVGNLRNQVVATVLSMVRPQEAAELEFLSVNYSQK
WKGAALSQGALYQNIMLENCHSLAPLDENRMVHSQLPPKQDISEELKSSDRILGVFCGVI
PAGQEAGTASKEASENLEVQPSDEEGTRLDSDFLEITQEDKKKSTEDQYDDYKELGGHLD
LSSSLSEHQGVLKGQKLYHCDECDKAFNRSSHLIGHQRIHTGEKPYECSECGKTFRQTSQ
LVVHLRIHTGEKPYECSDCGKTYRHSSHLIQHQRLHYGEKPYKCNECAKAFTQSSQLIDH
QRTHSGEKPYECNECGEAFIRNKSLIRHQVLHTGKKPYKCDECGKAFCSNRNLIDHQRIH
TGEKPFECNECGKAFSRSKCLIRHQSLHTGEKPYKCSECGKAFNQNSQLADHERIHTGEK
PFECNECGKAFGLSKCLIRHQRLHTGEKPYKCKECGKSFNQNSHLIIHQRIHTGEKPYEC
NECGKVFSYSSSLMVHQRTHTGEKPYKCKDCEKAFSDSSQLIVHQRVHTGEKPYECIECG
KAFSQRSTFNHHQRIHTGEKHSGLARSVS
Download sequence
Identical sequences E1BD47
ENSBTAP00000023585 ENSBTAP00000023585

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