SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSBTAP00000026440 from Bos taurus 69_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSBTAP00000026440
Domain Number 1 Region: 200-257
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.89e-22
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 2 Region: 270-322
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.61e-19
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 3 Region: 509-561
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.67e-17
Family Classic zinc finger, C2H2 0.004
Further Details:      
 
Domain Number 4 Region: 464-520
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.01e-16
Family Classic zinc finger, C2H2 0.0082
Further Details:      
 
Domain Number 5 Region: 423-473
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6e-16
Family Classic zinc finger, C2H2 0.008
Further Details:      
 
Domain Number 6 Region: 162-214
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000038
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 7 Region: 354-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000167
Family Classic zinc finger, C2H2 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000026440   Gene: ENSBTAG00000019844   Transcript: ENSBTAT00000026440
Sequence length 591
Comment pep:known chromosome:UMD3.1:4:113425036:113431085:-1 gene:ENSBTAG00000019844 transcript:ENSBTAT00000026440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRETLEALSSLGLSVGQPEMTPQSEPGEQSHDAQERMSPPQEQRVLGTSSGREAPRPEKG
ARTEQAETPCREDQVCAPRKPEPTGSCPGDEWMIRKVKVEEEEEDREAHKEAEWPQHLAL
RPSPFPPPDLGSLAAAYKLESGAPGTLGGLALAGWVPTASEKPYGCGECERRFRDQLTLR
LHQRLHRGEGPCACPDCGRSFTQRAHLLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLR
THTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCPECEKRFRKKTHLIRHQRIHTG
ERPYQCAQCARSFTHKQHLVRHQRVHAAAGRTPPSPGAPASPTSSASSPTASPPGPKPFS
CSHCGLSFGWKKNLTTHQRLHSGEERPFGCDECALGAPVDPAAPEPLACAPRGTPALPGT
PGGERSFLCPECGRSFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGA
RPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARSFSSKTNLVRHQAVHTGSRPFP
CPQCGKSFSRKTHLVRHQRIHGGAAHPASGSDLSSPAWPTSTDVTAPALFF
Download sequence
Identical sequences E1B706
9913.ENSBTAP00000026440 ENSBTAP00000026440 ENSBTAP00000026440 XP_003586073.1.76553 XP_010802966.1.76553 XP_010825775.1.59421 XP_015318655.1.59421

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]