SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSBTAP00000044404 from Bos taurus 69_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSBTAP00000044404
Domain Number 1 Region: 409-495
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 0.0000000000000222
Family Ypt/Rab-GAP domain of gyp1p 0.013
Further Details:      
 
Domain Number 2 Region: 245-324
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 0.0000471
Family Ypt/Rab-GAP domain of gyp1p 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000044404   Gene: ENSBTAG00000033214   Transcript: ENSBTAT00000047180
Sequence length 526
Comment pep:known chromosome:UMD3.1:6:47570062:47723788:1 gene:ENSBTAG00000033214 transcript:ENSBTAT00000047180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLQEESDLSLIIAQIVQKLKGSNLYAQLERQAWASLQRPEIKLESLKEDIKEFFKISGWE
KKLQNAVYSELSVFPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPL
ARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKDFLEVLINLRNPNYESGDSLSFRT
HLGLIQVPLKVKDIPELKEFFVELGLTTGQLGIDDSTQVPPELFENEHVRIGQKVLTQQD
SAAAQQYIRQGSPTALRAELWALILNISSHPEDILYYEQLKTNVIQHDLLVDSLIYKDVK
LTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAYNSASPPKSYIRGKLGLEEYAVFYPP
NGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFET
LLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVL
AAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLFATVT
Download sequence
Identical sequences Q08DJ1
NP_001070406.1.59421 NP_001070406.1.76553 XP_010804342.1.76553 ENSBTAP00000044404 ENSBTAP00000044404 9913.ENSBTAP00000044404

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]