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  Home > Genomes > Ciona savignyi 76_2.0 > ENSCSAVP00000000947

Domain assignment for ENSCSAVP00000000947 from Ciona savignyi 76_2.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCSAVP00000000947
Domain Number 1 Region: 1649-1675,1740-1865
Classification Level Classification E-value
Superfamily Ankyrin repeat 2.02e-32
Family Ankyrin repeat 0.00000337
Further Details:      
 
Domain Number 2 Region: 537-666
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000013
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 3 Region: 854-895
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000447
Family EGF-type module 0.0027
Further Details:      
 
Domain Number 4 Region: 815-859
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000613
Family EGF-type module 0.0067
Further Details:      
 
Domain Number 5 Region: 699-741
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000753
Family EGF-type module 0.0059
Further Details:      
 
Domain Number 6 Region: 1011-1145
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000105
Family Growth factor receptor domain 0.0081
Further Details:      
 
Domain Number 7 Region: 930-971
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000143
Family EGF-type module 0.0064
Further Details:      
 
Domain Number 8 Region: 234-277
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000168
Family EGF-type module 0.0097
Further Details:      
 
Domain Number 9 Region: 443-482
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000331
Family EGF-type module 0.0018
Further Details:      
 
Domain Number 10 Region: 968-1007
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000365
Family EGF-type module 0.0048
Further Details:      
 
Domain Number 11 Region: 892-935
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000001
Family EGF-type module 0.0063
Further Details:      
 
Domain Number 12 Region: 658-703
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000168
Family EGF-type module 0.0052
Further Details:      
 
Domain Number 13 Region: 736-780
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000232
Family EGF-type module 0.0059
Further Details:      
 
Domain Number 14 Region: 389-512
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000439
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 15 Region: 272-310
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000117
Family EGF-type module 0.0049
Further Details:      
 
Domain Number 16 Region: 196-238
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000179
Family EGF-type module 0.0053
Further Details:      
 
Domain Number 17 Region: 153-192
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000005
Family EGF-type module 0.018
Further Details:      
 
Domain Number 18 Region: 1141-1186
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000101
Family EGF-type module 0.011
Further Details:      
 
Domain Number 19 Region: 1285-1317
Classification Level Classification E-value
Superfamily Notch domain 0.000000288
Family Notch domain 0.0045
Further Details:      
 
Domain Number 20 Region: 15-64
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000407
Family EGF-type module 0.012
Further Details:      
 
Domain Number 21 Region: 112-154
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000008
Family EGF-type module 0.029
Further Details:      
 
Domain Number 22 Region: 777-821
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000839
Family EGF-type module 0.0092
Further Details:      
 
Domain Number 23 Region: 312-343
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000012
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 24 Region: 1243-1275
Classification Level Classification E-value
Superfamily Notch domain 0.00000235
Family Notch domain 0.0017
Further Details:      
 
Domain Number 25 Region: 1327-1356
Classification Level Classification E-value
Superfamily Notch domain 0.00000915
Family Notch domain 0.0029
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000000947
Domain Number - Region: 1184-1221
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000373
Family EGF-type module 0.02
Further Details:      
 
Domain Number - Region: 55-87
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000911
Family EGF-type module 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000000947   Gene: ENSCSAVG00000000533   Transcript: ENSCSAVT00000000957
Sequence length 1878
Comment pep:known reftig:CSAV2.0:reftig_235:10804:37506:-1 gene:ENSCSAVG00000000533 transcript:ENSCSAVT00000000957 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
CRTGYGGATCNVDDSSCDASHCLNGGTCHTSIEAGQVVRMCACPFAYTGSTCEVPISSCE
EADCVNGECEIRSGTAVCVCEQGFTGKPTVLVLIIFTFLHFSMKIPGSRCNQVDYCYTNP
CKNGANCTNRPLQFVCHCTANWFGATCQNFRSPCGAVRNICKNKGVCESAEDHYYCVCPN
GFTGAHCESEVLRKSSTPCTPDPCVNSGTCVEKSTTEHQCVCLPGFEGVNCEIDIDDCEG
DPCHNGATCIDQANSALCQCTDGWTGATCDVDVDECMLNPTACLNGGTCVNTEGSYQCTC
VNGWTGDDCSENVDDCASKPCFFQGTCVDYVGTFKCICPPGKTAIYFFLVKLIVIDIFLS
SKKCSRIFHASYQGFGWTNYKTIHVVIKCPAKYFVRLLCHMDNACEETPPPCAAWAQCEI
NPLTGTAICTCPEGYTGVNCSLDLNECDLGTNPCEYGGTCQNLPGTYECQCAPGFTGPRC
EVNINECESNPCVNDATCLDKIGKFLCLCMPGDSIPRMKSTQSPNIFRQPRRYTCNCQLG
YGGSLCDSPINECDSTPCQNGGTCHDLVASYSCDCPLGTSGTNCEINIQECASSPCQHGQ
CIDGINKYTCDCDPGYTGLHCEADIDECLSDPCYNGGTCINNLNSFVCHCPAGYNDPRCY
SNINECTSNPCQNGFCHDDINKYVCECNAGYEGVNCEYNIDECESKPCLNGASCVDHVDS
YSCTCRPGYKGVNCETDIDECHQSPCLNGGSCANLIGRYVCTCLLGFTGKWNCETALTPC
DPQPCNNGGSCHPNADYLGYSCTCTEGFQGPTCANDINECMTPPCKNGGKCRNLEPGYLC
DCLDGYTGTNCETNIDDCHPDPCMNGGTCLDDVNSYKCLCKRGFDGGQCQNDVDECASGP
CQNGATCTEYVNSYACTCQPGFRGSTCNENINECITGSCLNGGSCVDGINSYSCNCVAGF
TGNNCERDIDECSSSPCQNGAPCLHGIDTFTCQCLTGYTGPTCAMNIYTCTCVDGFVGTD
CATELNECSSDPCLHNGQCVDLVNSYKCLCQVGTSGDRCQDNENDCTPTSCLNSGSCVDG
IGGFTCNCVPGYAGPSENRDVNECSPNPCNPDGSTNCIQGINTFTCTCKQGFTGGRCEKQ
LTSCSTMPCLNGATCTDATYEPTGYRCTCPTGYRGTNCDEVMSKCHDGLVCYNGGTCHES
SSGGEICMCPADYNGDNCIYYIPGQPAGVGTNDISIPNVITKVCMDPSCAALKGNKECDS
KCNTYGCEYDGGDCSFGIADPWDKCPQTLQCQKYFHDGMCDEACNNADCLFDGFDCEDAQ
EACQSGFLEYCDRNYKNGQCDSGCNTQGCGWDGLDCDKDRPEQLAVGELILIVLISPEEL
IARQAEFMRLIGTIIHSVVQFKLTPTGEPFIEAIPSTLSRKRRSVLGALGWEKVIEIDRS
MFGNRTHTRLRRASDSFFSRAHLIVDTQKCKETSDQCVQATDNAASLIAARAGTNTLEAT
FPISTVDSSTSTTTASQDYTYIVGAAGGVVIVIVIIAVLTHRKRKRETSTLWSPEGFMVK
KQRREPIGQADFNLKLFPFINFICKNIFFLYFFINYFIFPQNNGYQGSTPVTNSTNRDDM
ETLDNRKWTPQHLEAADLPRGGSACTPDDVNARGPDGVTPLMIASIRGGGVDAGVSDDES
QHSGDAGGNGEGTNPKNNQLNFLKRPSKPQKQPTKLFKIPKQTPKTPIHPKQNQLTPPNR
TNDGTTPMILAARLAVEGMVEELINANADVNAVDDHGKSALHWAAAVNNVDAMTTLLRAG
CNRDAQTEREETPLFLASKEGSYEAIRILLDHYANRDITDHMDRLPRDIAQERLHTDIVQ
LLDEYNLVRSPPIPSGHM
Download sequence
Identical sequences H2Y6J9
ENSCSAVP00000000947

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.