SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCSAVP00000002483 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCSAVP00000002483
Domain Number 1 Region: 1420-1678
Classification Level Classification E-value
Superfamily YWTD domain 4.58e-44
Family YWTD domain 0.0000117
Further Details:      
 
Domain Number 2 Region: 358-591
Classification Level Classification E-value
Superfamily YWTD domain 2.09e-39
Family YWTD domain 0.0000123
Further Details:      
 
Domain Number 3 Region: 3188-3452
Classification Level Classification E-value
Superfamily YWTD domain 4.19e-37
Family YWTD domain 0.00000699
Further Details:      
 
Domain Number 4 Region: 2354-2600
Classification Level Classification E-value
Superfamily YWTD domain 4.58e-36
Family YWTD domain 0.0000314
Further Details:      
 
Domain Number 5 Region: 1725-2002
Classification Level Classification E-value
Superfamily YWTD domain 6.8e-33
Family YWTD domain 0.00017
Further Details:      
 
Domain Number 6 Region: 685-899
Classification Level Classification E-value
Superfamily YWTD domain 2.49e-32
Family YWTD domain 0.0000441
Further Details:      
 
Domain Number 7 Region: 2054-2305
Classification Level Classification E-value
Superfamily YWTD domain 4.19e-28
Family YWTD domain 0.00014
Further Details:      
 
Domain Number 8 Region: 3017-3058
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000196
Family LDL receptor-like module 0.00071
Further Details:      
 
Domain Number 9 Region: 1032-1069
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000103
Family LDL receptor-like module 0.00077
Further Details:      
 
Domain Number 10 Region: 203-318,600-654
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000115
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 11 Region: 3614-3652
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000471
Family LDL receptor-like module 0.00074
Further Details:      
 
Domain Number 12 Region: 1078-1116
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000589
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 13 Region: 1246-1284
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000183
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 14 Region: 2723-2765
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000223
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 15 Region: 2890-2927
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000314
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 16 Region: 157-197
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000432
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 17 Region: 3133-3181
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000046
Family EGF-type module 0.0077
Further Details:      
 
Domain Number 18 Region: 2978-3017
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000563
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 19 Region: 3775-3815
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000072
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 20 Region: 3736-3777
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000812
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 21 Region: 120-159
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000929
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 22 Region: 982-1022
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000106
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 23 Region: 2688-2731
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000157
Family LDL receptor-like module 0.00092
Further Details:      
 
Domain Number 24 Region: 1206-1241
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000017
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 25 Region: 3061-3098
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 26 Region: 38-78
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 27 Region: 1121-1158
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 28 Region: 3100-3148
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000402
Family EGF-type module 0.014
Further Details:      
 
Domain Number 29 Region: 3823-3861
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000746
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 30 Region: 3700-3737
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000103
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 31 Region: 4-39
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000117
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 32 Region: 3497-3535
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000131
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 33 Region: 3535-3575
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 34 Region: 2845-2885
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 35 Region: 2808-2847
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000017
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 36 Region: 3909-3947
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000209
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 37 Region: 1362-1408
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000271
Family EGF-type module 0.0067
Further Details:      
 
Domain Number 38 Region: 1682-1718,1998-2048
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000832
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 39 Region: 3579-3621
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000157
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 40 Region: 1164-1199
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000209
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 41 Region: 2933-2976
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000262
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 42 Region: 83-115
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000157
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 43 Region: 3663-3697
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000262
Family LDL receptor-like module 0.0022
Further Details:      
 
Domain Number 44 Region: 2763-2805
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000432
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 45 Region: 3991-4027
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000559
Family EGF-type module 0.0074
Further Details:      
 
Domain Number 46 Region: 2310-2357
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000586
Family EGF-type module 0.023
Further Details:      
 
Domain Number 47 Region: 1288-1326
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000144
Family LDL receptor-like module 0.0022
Further Details:      
 
Domain Number 48 Region: 3865-3899
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000038
Family LDL receptor-like module 0.0026
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000002483
Domain Number - Region: 3459-3516
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000718
Family EGF-type module 0.023
Further Details:      
 
Domain Number - Region: 3953-3998
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0103
Family EGF-type module 0.013
Further Details:      
 
Domain Number - Region: 1329-1376
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0177
Family EGF-type module 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000002483   Gene: ENSCSAVG00000001468   Transcript: ENSCSAVT00000002524
Sequence length 4027
Comment pep:novel reftig:CSAV2.0:reftig_55:1306888:1357381:-1 gene:ENSCSAVG00000001468 transcript:ENSCSAVT00000002524 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AAASCRSSEFQCSDGSCILSEFRCDGDPDCSDGGDEQACPGATCSSSEFTCANNYCIDAD
LKCDHVNDCPDNSDEQGCSYPTCDELKCKNGACFTSAQRCDGNVDCRDESDEFNCSESST
QCSSNEFQCDNGKCIPQSFYCDVWNNCGDGSDEPDGVCVYPSCPGNTFTCDNSVCVNQEW
VCDGTDNCGDGSDEENCDYAIPCLNNQWRCTNSSRCINVVQICDGKIDCEDGTDESQTGS
TKCGILSCDGYCRATPQGGTCYCDDGYQVGDDGISCKDFDECTVFGQCEQKCENTVGSFK
CGCADGYIPEQSHDHLHCKATPTGLPFISGAPRLLFSAGPNIYFNDFLNDKLDIAVEAGS
PIGVDYHYELGKIFWSDAILQKVMSANTDGNNQKVILDKAISDPEQVAVDWIGNNLYVVE
TKVGRIDICNFDGSHRTGVVTNGLRNPRGLALDPTKGYMFFTDWYTTTARLDRAYMDGSE
LYTIVDTSVGYPSGITVDFTNSRVYWVDTKFDYVETVDYNGKNRRTILSGSHLLPWPYDV
TLFEEHVYISDATKLGILRGNKFNGSIDYALVTKTGVIPNGLIAYHPSRQPKEFNVFKKN
NIDRLFFAVDNPCAVQNGGCAHLCVLSHVLDGLGYSCLCDLGYVLNMDRKSCKHSDDFIL
AASYGSIQGIPTGRFQQTDAMLPILSNGQQYFMSVTSDAVNGYIYYGENGKDIIYRTLMN
GTGKAEEIVTNRVRLIRALALDWTTGNLYIVDSSMDRITVVNTKDPTNLRKTVVSGDVWS
PTSIAISPNRGYMVWTDTYRPARIERAWMDGSNRMSLVNQTLYYPQAITIDLVTGYVYWI
DSGFDRIERISINGYSRKEVLVSQAISYPRAITFLNDYIYWYDGRYNSLFRVPDFVTSQT
LQTETVRSGLYSVYTLDAFNKDIQNRYMNNQCNRASLPNGGCQLLCFPAPLSEYIQPNYS
RTCGCPDNMLPDGNNCRPNPHVTPEPPCSSYQFQCANEKCIYTSYRCNGIDDCGDNSDED
DELCGQQIIYFKGGTCRSYQFQCNNGKCIYTSWKCDGDDDCGDNSDEAGSNKMVNIFRTR
PCSSYNFQCDNGQCIPKSWVCDTDNDCGDASDEKDCELFDLKTCSSTQFTCSSHLCISQY
LVCNGFDDCPDGIDENDCPDVTCNPQYSFACADKKQCVSKTYKCDGHPDCRDGSDEQGCP
SKPPGYCESNEFQCQTSGMCIPSGWFCDARVDCDDGSDEPPTSDTTCRSYQFKCKNRVCI
YNSYVCNGDNDCGDNSDEEDCPTPPPTLPPPPCGTMDFECPGTKKCISYNKVCDGVEDCS
FGTDEDTFCDADLCSGFGCTDQCVNLPTGPLCWCDGSGYELLNDSKTCADIDECARRYCS
QACDNTEGSFYCKCDSGYQLDTDGRTCKVTSKLFCEPRIITVSNRYYLYQLNLDTNARKT
ALYSRNLLGNDFDWATRKIYYADTYYGNLYKAFLNGTMREIVFSSGTSITENIAVDWVAR
NLYWCDYDLGTIEVARIDGTHRAILHAMNVTNPRGLALDPRDGYHYLFWTDWGQNPRIER
CDMDGNHRKSIITDRLFWPNGLTIDYPNTMVYADAKLDFIHRCGYDGQDRTEVLAGTNFI
RHPHSLTILEDYLYWTDRETYSVSRCNKWDGSKNQTKVMTGLYYPTDLHAFHPVRQPAGT
NYCEGNPCSHICLLGNFRPRYYTCACPVGSSLTDTHTCTPNQDDFILVSTPGRIFGIALD
PEDQESDKMIPVTNIVNGMDVEHDDSQGWVYWTQQCDSSVTLPQPYVSTKGYMSLEPINQ
HLPMEICWAYPNALAFDWVSRNMYYTNPDAKHIEVIRVDPGNNRQYYRRTIIGNIGNETG
VANPIGLAVDPQNGKLYWSDQGGDGIPPKISRCNMDGSYIENIITTSVNNIQHIALDYSG
GRIFWAEQNSGSIMSATTDGTDIRTIVDNVIRPMGLTVIGDYIYYSDLSLQLIERADKTN
GNNQQILRSDVEDVTSLKIFNRPLSLANDCSKTINGGCQQLCFVVGGSRRCSCSTGFTLN
GDGVTCSSSDSFALVSLGNNLRGFNLDGASHVDAMPPIGGSTSGGYLGYLFNVVYAADRD
NGYARQVVIGGIGSRGITGFAYDWVSQNIFFLNGFTRETYLEVGTYNRRYRLILIKIVDD
MPVAIAINPLKRLLYWADYGQVPKIESAYMDGTNRTILATSGLTQPRSIVIDYSTHDVYW
CDEQSSTIEKMSWDGSNRVTIRSGRNYPSPRGVAVYQDYIYWVDPTWKSLFRASTDPSNQ
DDPEKLRDGLENPQDVAIYDQSIQPDDPSNNPCANNNGGCSQLCIALPDNSRVCKCAFGK
IGNDGTSCNDAEDYVVFTTTRDISGFHVDPDDHSLIFPTVTASYPIAVAHDLQDNRAYFA
TVIFLLFDIKIVSNNNSGIEYSLSKQIRIKHLYPGLDFDWVHRKLYYTDNSLKIIGSVSP
DGSNMTTVVSGLNLPRGIAVDPCRGYIYWTDWGTHTIERSTLVGNGRTVIVSEDLLWPNG
VTIDFDEDKLYWVDAEPKERVERSNMDGTERELIIPSLDHPFAIAILDQFVYWTDWSTRG
VYRAEKQTGGFVTQMRTQLRQHTYGHSWLFHTITRRKHLYGFLLSIVHTASPLHRFNGGC
SDICSIGPSNTAECSCPIDDGKKYYLANNGKDCIEDVSVLTIMFDCDRCNANQYTCSNGI
CRPLSWVCDGYTDCSDGADEAERTCADHTCESHRHRCPNGRCIPISFVCDFDDDCGDGSD
EQGCPTPTCASDEFECLYGRCLSISQVCNGYDNCRDGVVSDEKDCNHTTCRPGYHKCTNT
NVCIYGGWLCDGDNDCGDNSDEAPVFCAGKTCRSGQFQCDNVYQCIPLTWYCDDYNDCDD
GSDEPTQCTHPDRTCPQGAFTCDNGRCINIDWVCNGVNDCNDNSDEDERQDCGSRTCQST
EFTCEGNPPGHSRCISRLFVCDGDIDCEDGADELQPECPPTICNENQFNCTNGLCIPKYY
VCDHDNDCGDYSDEYGDCVYQTCSSYQFTCENGKCIPKSWTCDGRNDCTDNSDEVSCPTG
PPTCGPDMFMCKNGQCIDMGVVCDRNPDCSDRSDEERCGLNECATIASNQCAQLCVDTLT
SYYCDCNPGFRLLADGKACEDINECIETPWVCSQLCDNIEGSYYCKCGSGYLREPDGVTC
RQNSGIEPYILFSNRYYIRKIAVDGSDYELVTQGDTVVALDYDYQGQRMYWTDVTAKQIG
SMKFDGTDKKTLFHREVPDGEGLAVEWVTGKLYWLDATLRALHVSELNGTSKLTLMKGCI
DVNRTYCFHSPRALALHPKRSLLFWTDLGLKPYIAKAYLNGDNAQTVITTVVGWPSALTI
DYVTERIYWGDAHLNAIQFSDMDGNNRHRLYLNGLNQPMAFAITFFESYIYWTDYSTYSM
YKAHGLDGSNLQRLVNSTHRQYDLHVVHPYRQDNRLTNPCEMNNGDCSHLCLMAMDGNKE
CKCPDNFVSVSQERLCFPACTSAQYRCDSTEKCIPIYWKCDGVEDCPDGSDEPDTCPPRS
CPIGYFQCVDYGCVKPEYMCDGDNDCDDGSDEVNCDDYPCLDTQFKCGNGKCLSNSRVCN
GFDECGDNSDEDADMCAQHTCPVGHFQCDNGRCIPSNWWCDVDNDCGDGSDEPVAVDQHV
CRPELDFACKTNYRCVPKYSMCNGIDDCYDNSDEEQCSQMTCDPNNDYQCPNFRCIPLRW
RCDDYNDCGDNSDEVGCAPRQCSESEFRCDNLQCIPGDWVCDQYDNCGDGSDERGCTAAT
CSTGFFECTSGHCVPSSVVCDGDRDCLDASDEAACVPKFPGGRYCPNNRFQCDNHVCVNL
NFRCDGQNDCGDESDEYPSVCESIDCVSPKWRCEKTRLCIFENQKCDGKDDCKDGTDETI
EMCHPTTVAPTCTAGQYKCFNGKCVSELVVCNDVDDCGDQTDESGCHKGDTTHTCADKPC
EQVCTTIPSFGDIPGYYLCSCNDGFTVNSDNTHSCDDINECFESWSTCSQICRNTKGSYQ
CECGDGY
Download sequence
Identical sequences H2YAY5
ENSCSAVP00000002483

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]