SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCSAVP00000003575 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCSAVP00000003575
Domain Number 1 Region: 564-743
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 1.44e-46
Family DBL homology domain (DH-domain) 0.00000184
Further Details:      
 
Domain Number 2 Region: 752-877
Classification Level Classification E-value
Superfamily PH domain-like 8.58e-18
Family Pleckstrin-homology domain (PH domain) 0.00034
Further Details:      
 
Domain Number 3 Region: 272-383
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000158
Family Spectrin repeat 0.0077
Further Details:      
 
Domain Number 4 Region: 3-158
Classification Level Classification E-value
Superfamily CRAL/TRIO domain 0.00000209
Family CRAL/TRIO domain 0.01
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000003575
Domain Number - Region: 378-490
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0273
Family Spectrin repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000003575   Gene: ENSCSAVG00000002125   Transcript: ENSCSAVT00000003630
Sequence length 878
Comment pep:novel reftig:CSAV2.0:reftig_167:84609:99192:1 gene:ENSCSAVG00000002125 transcript:ENSCSAVT00000003630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LRHHLQQCYVYIHGGKDMSGSPVICFPHFPGLHDVSNEGFKDTLYYLTHTTRYSLADLGF
VVILDRRKDKWSSLKATLVRLAENFPGNIRIVLVLKPLGFLQGAITNFGFRWQKDEFAMK
VPVVLLSSLDDLSRYVLPTELTNHFGGTFQYDHITWINNRMLVETFSAKATSAILALEEY
GSQLAESELPNDSKSAVVLINTQQIRTNTQKDGIEMLRKEAALLRNEISISNNNDVNAIE
AASLRHVVWYVFNRLPYYETLISETDVTFDNFWLKYKEKMKQCLQLRLFEEDYRDVCSKL
ETVRQQIESKYLNVGITFPWLEAFISGLSDLEQSTNECLEVCGKVRQHGCDLVAAGHYAV
DCIQPKTDELQNQTCEIKEQITELQCSFKSYQHFINQLNEVRQWCEDGMAFLAGQVLETS
LTVDGANSALNELEIKFEKKEQNVQILVENSVVQSQCGRLWSAEAEELSCHVKSRLTEVT
LLYEKRRSSLKKAATKHGERPVQLVEPSKKVVSTTKGSKRDPPRDGKEQVVSQAKNYYIV
FFNFYNKNKILKNSFYLQISNISRHVMKELVSTEKTYISELKSIVEGYGRPMDDPTHPRV
PATLLGKSKELLGNMDEIYDFHSNVFLGLLEECVDNPSSVGRCFLSKKENFEIYSKYCQN
SIKSEQLRRLVGEQHPFFMQCQQKLGHRLSLSAFLLKPVQRVTKYQLLLQQMLKYSNSHL
KELQTALDAMLEILKSVNDGMHQVMITGYQDDLTLLGKLHLQSQFTMQVDHKKSRVKSLK
RPRFSKAIQRHLFLYDDEILICKPQTMESLDDNDNHFKSNNQSVASMENAGMLDTIKSDP
RKFEVWSEGREHVYTLQAPTIITKQEWIKGLKSILMNK
Download sequence
Identical sequences H2YE27
ENSCSAVP00000003575 51511.ENSCSAVP00000003575 ENSCSAVP00000003575

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]