SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCSAVP00000005937 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCSAVP00000005937
Domain Number 1 Region: 108-363
Classification Level Classification E-value
Superfamily vWA-like 5e-71
Family Integrin A (or I) domain 0.000000566
Further Details:      
 
Domain Number 2 Region: 367-452
Classification Level Classification E-value
Superfamily Integrin domains 0.00000000141
Family Integrin domains 0.0035
Further Details:      
 
Domain Number 3 Region: 6-61
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000628
Family Plexin repeat 0.0026
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000005937
Domain Number - Region: 506-533
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0251
Family Integrin beta EGF-like domains 0.036
Further Details:      
 
Domain Number - Region: 595-620
Classification Level Classification E-value
Superfamily EGF/Laminin 0.046
Family Integrin beta EGF-like domains 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000005937   Gene: ENSCSAVG00000003541   Transcript: ENSCSAVT00000006012
Sequence length 821
Comment pep:novel reftig:CSAV2.0:reftig_46:422588:442727:-1 gene:ENSCSAVG00000003541 transcript:ENSCSAVT00000006012 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TADIDKLCEDNTITSCDQCIQKHPQCAWCSKSNVNSNIKRCRNFCSRKTSALCDQAFVEM
PRSNANFAQNQQFSTREEAVVVQLRPQVIDINLRKGDTVKFNVSFRKVKDYPVDLYYVMD
LSNSMKDDLAELQKLGESLATQIRQNVTSDINMGFGTFVDKVMMPFTSTVPDQLINPCAK
SKEACAPPFGFRHQQSISGDLTAFKQSVQNTNISGNIDSPEGGFDALMQIAVCGGQIGWR
GDASHLVVFTTDASFHTALDGKLAAILDANDMKCHLKRVRGTLVSQNALVYDKSKELDYP
SIGQLRAAFVANKIQPIFAVTKEVRSLYDGLKELIPNSFVDELASDSNNIISIIKTAYNK
LREKLQMSLDDDNKPEGVGISYRTLCPNATTWSDNSLSCNQIQLGSEVTYEFTVTATACP
TTSASNTMLFTSSSLQESVTFRFNFLCNCNCSSMVEQKSIDCSSNGSMVCGACLCDQGHE
GSRCQCTQNTIGLSLSAQCKRSDSADICERNGECLCGICDCHENFHGKYCQCSNTGCPVT
DGNVCGKGGTCENCYNQPKCNCTAKINNIPYTLDNVGSCTCHESNCIDPSNPNATVCSSH
GNCSCSICECDPKYDGKYCQDCNSPLCKTVTAECSSHEACAICVNSAVQNRENANDKCQV
PCKDVTFQTVKTIPDCSLCTGNTEACPSACSEVDPSILAPTPCSQAQSTGQCKVSYNIVW
HKQSKNYLVLIKEFDQATGKYMFHCPKPIDPVIIVLPIVAGIVVLGMIALIAWKVYQTWR
DKREWQVFENEMKKSKWTKDINPVFQKPKTRFENPAYGGDE
Download sequence
Identical sequences H2YKT5
ENSCSAVP00000005937 ENSCSAVP00000005937 51511.ENSCSAVP00000005937

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]