SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCSAVP00000006056 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCSAVP00000006056
Domain Number 1 Region: 1-136
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 3.57e-36
Family Cofilin-like 0.0024
Further Details:      
 
Domain Number 2 Region: 346-403
Classification Level Classification E-value
Superfamily SH3-domain 5.91e-21
Family SH3-domain 0.00063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000006056   Gene: ENSCSAVG00000003619   Transcript: ENSCSAVT00000006133
Sequence length 404
Comment pep:known reftig:CSAV2.0:reftig_997:25517:38373:-1 gene:ENSCSAVG00000003619 transcript:ENSCSAVT00000006133 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSVNFFKHKAKLVEAYKDVLDDNSDTDWALFSYEGNQNDLKLQDTGDEGLEELEPEFNSG
KIMYAFVRVKDPNTKLTKFILIVWQGEGVPATRKGACANHVKDIARFFQGSHMTIYCRND
DEITPEEIMKQVTKATSNFSFVAPKEDISVPSPVSSVYQPINPQREILSSRNDKFWIKMQ
QEEDARKAEEKQKAVNLRKQEAVEIREREKKWVEARNQMVKQRERDIAEKLRAQKLADDR
SDIREKEKAAWAEVLTTQRANNPRAMWAQREKEASAPPPQEPSYQPEPSYEPEQSYAQVE
PEAQPSDDANQIYGNEPVETTADQQNNQQEPYDDQAGIYSEVPADEPSCSAEALYDYQAE
DDTEISFDPGEVVTDIEQIDEGWWRGTAPDGSRGIFPANYVRLL
Download sequence
Identical sequences H2YL54
ENSCSAVP00000006056

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]