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Domain assignment for ENSCSAVP00000012835 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCSAVP00000012835
Domain Number 1 Region: 159-251,441-525
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.35e-41
Family Canonical RBD 0.0000293
Further Details:      
 
Domain Number 2 Region: 37-154
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.48e-21
Family Canonical RBD 0.0032
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000012835
Domain Number - Region: 260-322
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 0.000109
Family Pentapeptide repeats 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000012835   Gene: ENSCSAVG00000007538   Transcript: ENSCSAVT00000012984
Sequence length 529
Comment pep:known reftig:CSAV2.0:reftig_77:2730726:2746135:1 gene:ENSCSAVG00000007538 transcript:ENSCSAVT00000012984 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAMTVHGNQYLQHALPPVMSSTVPMAVHSESSYGGHGYLYPHVPLIPANCGSNIDRMHPF
KEAPEKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKYTGMHKGCAFLTYA
HKTAAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGGKDDRKLFVGMLGKRQNEEDVRVL
FEPFGTIEECTILRTPEGQSKGCAFVKLACHSEAKTAMDALHGSQTMPGASSSLVVKFAD
TDKERAVRRMQQMAQTLNKLKLTKLSLTKLRITKLSLTKLRLTKLRLTKLRLTKLRLTKL
RLTKLRLTKPRLTKLSLTELSLTKPRLPTHRTLSQRPQVGTRSPPNQPRSTDSRKPLPSS
RSLLVSSVRDYYNSNAFFIPPFYGTSPRISNPLHPTVIHHQHATPVNGIPSTPQSPVAPA
ITTLNLLPPPSSATASTPEGPEGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRA
TNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY
Download sequence
Identical sequences H2Z5H3
ENSCSAVP00000012835

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