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Domain assignment for ENSCSAVP00000013352 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCSAVP00000013352
Domain Number 1 Region: 58-325
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.36e-71
Family Nuclear receptor ligand-binding domain 0.0000000246
Further Details:      
 
Domain Number 2 Region: 5-86
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.55e-30
Family Nuclear receptor 0.0000142
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000013352   Gene: ENSCSAVG00000007831   Transcript: ENSCSAVT00000013503
Sequence length 330
Comment pep:known reftig:CSAV2.0:reftig_140:872008:878468:-1 gene:ENSCSAVG00000007831 transcript:ENSCSAVT00000013503 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSMSKHICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKFLTYTCRDDKDCIIDKRQRNRC
QYCRYQKCTAMGMKKEAVQEERQKNRDQDEVIGDTSHDDMPVDKILQAELASDPKLEELI
SMQEVFLVSVHESNGSLLFVCKAADHQLFTLVEWAKRVPMFTTLPLDDQVTLLRAGWNEL
LIASFSHRSIEISDGIILASGLRVYRQTAHSAGVGAIFDRVLTELIAKMRDMAMDRTELG
CLRSIVLFNPDAKELTDAAYIETLREKVYASLEVYCKSKYPEQTGRFAKLLLRLPALRSI
GLKCLEHLFFFKLIGNTPIDQFLMDKLAPN
Download sequence
Identical sequences H2Z6Z0
ENSCSAVP00000013352

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