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Domain assignment for ENSCSAVP00000014386 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCSAVP00000014386
Domain Number 1 Region: 190-280
Classification Level Classification E-value
Superfamily HMG-box 3.53e-27
Family HMG-box 0.0000477
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000014386   Gene: ENSCSAVG00000008424   Transcript: ENSCSAVT00000014551
Sequence length 811
Comment pep:novel reftig:CSAV2.0:reftig_16:1752066:1754830:1 gene:ENSCSAVG00000008424 transcript:ENSCSAVT00000014551 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNNDMTLLSGHKTSMFNQQQTNQENWSVSPASPETDIMDHLSKTAVANYPRFDSSITEEF
ASGMEAKDRKTKGSSGVHFVPEDLFKPNQDENSTSTSEIFSMSSPENLSSFCNVKSAVAV
ARAAATLLESKSSEEESYEESMMLNTGSCTRGSPGMNDDLSDRDSIPDKDDMSKDIKDAV
SQVLKGYDWTLVPMPVRMNGSQKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSK
TLGKLWRLLSEPEKKPFVDEAERLRIKHKKDHPDYKYQPRRRKGSKAATGAGESTQGAQN
QSPKQPSGKVRKQDSQSSDECQAVQQTLVANPITGKQQVKQQITNQHSPQSVCHSPNNPS
PSQQGSMTNIYDVLHREQRNYHESPDATVPCSPPTGPINESSKSHVKLHSRNSSFGSKQQ
RGASVDLPSDCSTHSMQGVMETNSQDIINKPSFDVAEFEQYMPVTCHQPLTRQHEEAFGY
SCMGEPHAKQPRCNFNESSQNMPSPADCPVQHSAMFSPGKQGNPQYRTSSWVEGYDASVM
TEPSVSPTASLDQQQFNQPENFTYADATSACSPLHSASVTSQSGDFNTYSMNQASPRAGG
DLPVKKEQVSPIQQHFFPHMAPPTRFQCSELHKTTEVVPQPYQAYFDANMQRTPQMDDVI
EQRNEAIFRHNAYDHSGSYSNLHGRFETCSAKQQEMALNSPSRCSPDPSRPFEHSAYDAN
ITNPLQRRFSLPLIPQNQQQAGTPNPTYRHFGHSHNQGLAPHYPKPNERQQLYSAPEDFS
YPHNSHYNMGQQQQSNWPMVSSSAEVFSPPH
Download sequence
Identical sequences H2Z9X1
ENSCSAVP00000014386 51511.ENSCSAVP00000014386 ENSCSAVP00000014386

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