SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|297526102|ref|YP_003668126.1| from Staphylothermus hellenicus DSM 12710

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|297526102|ref|YP_003668126.1|
Domain Number 1 Region: 24-208,256-367
Classification Level Classification E-value
Superfamily Pseudouridine synthase 2.01e-49
Family tRNA pseudouridine synthase TruD 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|297526102|ref|YP_003668126.1|
Sequence length 375
Comment tRNA pseudouridine synthase D TruD [Staphylothermus hellenicus DSM 12710]
Sequence
MTLETPPCKEFIYVHPLDYVSATKYYLTCAKLDTKYYPSTETFIVEEIIDWKKLGFSKEN
GDYAVFEIRKRNIDTLKAIRIIAKDLGIPEQNILFLGFKDRDSRSKQFFFIRKNIIYDHL
VYEKVMHRDLEYEFIGYVRRKPRRKDLIGNKFVLIVKDVDKKDRDTTDHIMNMIVRHGLP
SYYGYQRFGLKRFNSHLLGKYLLTGRIDLFIREFLEGIYPSESDESIYNRSFLRFEKLLY
EKILVNAVDVFKAVNKINRMIRNILVDAYAAFLYNLLLNKIVEEKGWIGLDKVLPLPGCF
EGADFYGDILRVEGFDHSVMKHLGCWYRKGLFRPINTGLVLVGDVLKISFLLESGMYASI
IMRELFKDNLLFTRT
Download sequence
Identical sequences D7DAN0
WP_013142425.1.49614 gi|297526102|ref|YP_003668126.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]